Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01482 ATGGCGATCCCTTTTTATAAACTCAGACATGGTGGCTATGAATTTAAGTTCTCTGAGGCTTTTATTTTATACAGATGCCAGGACACTATGATCGGTGGCTCCTTTGTTCGTGGGGTATCAGGTGGGGAAAGAAAGAGAGTTTGTATTGGCAACGAGATTATAATCAACCCATCTCTTTTGTTTCTTGATGAACCAACTTCTGGTTTAGATTCAACAACTGCCCTAAGGATCGTTCAGATGCTACAGGACATAGCGCAGGCTGGCAAAACAGTAGTGACGACGATTCATCAACCCTCTAGCAGACTCTTCCACAAATTTGACAAGTTGATTCTTTTAGGGAAAGGGTGCCTTCTTTACTTTGGGAAAGCTTCAGATGCAATGCCTTACTTCAAATCCATAGGGTGTTCCCCTCTTATTGCCATGAACCCAGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATCAATGATGTTTCTATTCCATCAGAGTTGGAAGATAGAGTGCAAATGGAAAACTCAGAAAATGAGGTCAAACACGGGAAGCCGTCACCAACAGTTGTTCACGAGTATCTTGTGGAGGCCTGTGAAACACGTGTTGCAGAAGCAGAGAAGAAGAGAATACTGGATCCTTTGCATCTGGATGAAGAATTGAAGTCCAAAGTCAGCCACAATAAAAAACGATGGGGGGCAAGTTGGTGGCAACAGTATACGATATTGTTTGTAAGGGGTATTAAAGAGCGAAGGCATGAATATTTTAGCTGGTTGAGAATAACACAGGTTCTCTGCACTGCAATAATCCTTGGATTGCTATGGTGGCAGTCAGATGGTAAAACACCAGAAGGCCTGCGAGATCAGGTGGGACTGCTTTTCTTCATTGCAGTCTTCTGGGGATTTTTTCCTGTTTTTACTGCAATATTTACGTTTCCTCAAGAAAGAGCCATGCTGAACAAGGAACGAGCAGCTGACATGTACAGGCTAAGCGCATACTTCTTGGCCAGGACTACAAGTGACCTCCCGCTTGACCTGATACTACCTGTGCTTTTCCTTCTCGTTGTTTACTTCATGGCAGGGTTAAGATTGAGTGCTGCTCCCTTTTTGCTAAGCATCCTTACAGTTTTACTCTGCATTGTAGCAGCTCAGGGACTTGGACTCGCTATTGGAGCAACGCTCATGGACATCAAGAAGGCAACAACACTAGCTTCAGTAACAGTGATGACCTTCATGCTGGCTGGAGGTTTCTTCGTTAAGAAAGTGCCAATATTTATATCTTGGATCCGCTATTTGTCTTTCAACTACCACACATATAAGCTTCTGCTGAAGGTGCAGTACAGCCACATAACACCCGCCACAGATGGCCTGATAACCGCCAACAATGGTTTGACAGAAATCATTGCTCTGATAGCCATGGTTATCGGATACCGTATCTTAGCATACCTTTCTTTGAGATGGATGAATGTCCCATCTGGAGCTTAA 1473 0.4372 MAIPFYKLRHGGYEFKFSEAFILYRCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSLLFLDEPTSGLDSTTALRIVQMLQDIAQAGKTVVTTIHQPSSRLFHKFDKLILLGKGCLLYFGKASDAMPYFKSIGCSPLIAMNPAEFLLDLANGNINDVSIPSELEDRVQMENSENEVKHGKPSPTVVHEYLVEACETRVAEAEKKRILDPLHLDEELKSKVSHNKKRWGASWWQQYTILFVRGIKERRHEYFSWLRITQVLCTAIILGLLWWQSDGKTPEGLRDQVGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSAAPFLLSILTVLLCIVAAQGLGLAIGATLMDIKKATTLASVTVMTFMLAGGFFVKKVPIFISWIRYLSFNYHTYKLLLKVQYSHITPATDGLITANNGLTEIIALIAMVIGYRILAYLSLRWMNVPSGA* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01482 490 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 478 - -
Pte18g01482 490 Pfam ABC-2 type transporter 234 443 IPR013525 GO:0016020|GO:0140359
Pte18g01482 490 Gene3D - 14 132 IPR027417 -
Pte18g01482 490 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01482 Pte-Chr18 26444195 26446470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01482 28 168 Calmodulin-binding Proteins AT2G36910 27.660 2.14e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01482 K05681 - pvy:116118611 781.556