Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01480 ATGGGTAACACATGCGCTGGACCAAACCTAGGCAGTCGTGGCTTCTTTCAAACTTTTGGTGCCGCTATGTGGAAAGCTAGGCCACCAGAGAACAGGCTGCCCGCACCTGATGCTGAAAGCGATACTAAGAATGCCTCGAATGACACTAATGATTCTTCGAAGCCTGCTGGGGCTATGAATGATAATGGTGCCGCAGTACCGGTTCAAAGTACACCACCTAAAGCTGTCAAGATACACTGTGATGTTCCTAATAAACCAGAGGGAAACAAAGCGGAACAGAAGCCCGTTGATGCTGACAAATCTAACAAACCTACTCAGCTTAATAGGGTAGCGAGCATGGGAATTCAACTGGATTGTGTTTTAGGAAGGAAAACAGGAAACCTTAAAGAGCTGTATACATTGGGGAGGAAACTTGGACAAGGGCAATTTGGAACTACATTTCTCTGTTTAGAGAAGGGAACTAATAAACAGTTTGCTTGCAAGACAATTGCAAAAAGAAAATTGACCACAAAAGAAGACGTGGAAGATGTTCGGAGAGAGATTCAGATAATGCATCATATGGCAGGTCACCCCAATGTGATACAAATAGTGAATGCTTATGAGGATGCTGTCTCAGTTCATGTTATCATGGATCTTTGTGCTGGCGGAGAGCTTTTTGACAGAATCATACAGAGGGGGCATTATACAGAGAAGAAAGCTGCTGAACTTGCTAGGATAATAGTGGGCGTCGTTGAGGCATGCCATTCATTGGGTGTTATGCATAGGGACTTGAAGCCAGAAAATTTTCTTTTCGTTAACCAAGAGGAAGAAGCACCACTTAAGACGATAGACTTTGGCCTCTCCATATTTTTCAGACCAGGTGAAATATTCACTGAGGTTGTTGGGAGTCCTTATTACGTGGCCCCGGAAGTTTTACTTAAATACTATGGTCCAGAATGCGATGTCTGGAGTGCGGGTGTGATCATTTACATTTTACTAAGTGGAGTTCCTCCATTCTGGGATGAAACGGAGCAAGGAATATTTGAGCAGGTTTTGAGAGGGGAGCTTGACTTTGTCTCAGAACCATGGCCGAGTATATCTGAACAAGCTAAGGATCTTGTCAGAAGAATGCTCGTTAGAGACCGCAAAAAGCGAATCACAGCGCATGAAGTCTTGTGCCATCCGTGGGTGCGGGTTGACGGTGTTGCTCCTGATAAGCCTCTCGATTCTGCTGTACTTTCACGTTTGAAGCAATTCTCTGCTATGAACAAGCTAAAAAAAATTGCTATTAGAGTAATTGCAGAGACTCTTTCTGAAGAGGAAATTGGAGGCCTAAAAGAGATGTTCAAGATGATAGATGTGGATAATAGCGGACATATCACTCTTGAGGAACTGAAAAATGGGTTGGAAAAAGTGGGCTCTAACCTTAAGGATTCTGAAATTCTTGGGTTGATGCAAGCAGCAGACGTTGATAGCAGTGGTACCATCGACTATGGCGAATTCGTTGCAGCCATGCTTCATATGAACAAGATCCAGAAGGAGGATCACCTCTTTGCAGCCTTCAATTATTTTGATAAAGATGGCAGTGGCTACATTACACAAGATGAGCTCCAACAAGTCTGCCAGCAGTTTGGCTTCGAAGAATCTCATCTGGACGATTTAATATGTGAAGTTGACCAGGACAAAGATGGTCGTATTGATTATAATGAATTCGTTGATATGATGCAAGATGCTAATTTTGGTAAGATGGGGCTTGCATGCTGA 1743 0.4337 MGNTCAGPNLGSRGFFQTFGAAMWKARPPENRLPAPDAESDTKNASNDTNDSSKPAGAMNDNGAAVPVQSTPPKAVKIHCDVPNKPEGNKAEQKPVDADKSNKPTQLNRVASMGIQLDCVLGRKTGNLKELYTLGRKLGQGQFGTTFLCLEKGTNKQFACKTIAKRKLTTKEDVEDVRREIQIMHHMAGHPNVIQIVNAYEDAVSVHVIMDLCAGGELFDRIIQRGHYTEKKAAELARIIVGVVEACHSLGVMHRDLKPENFLFVNQEEEAPLKTIDFGLSIFFRPGEIFTEVVGSPYYVAPEVLLKYYGPECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLRGELDFVSEPWPSISEQAKDLVRRMLVRDRKKRITAHEVLCHPWVRVDGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAETLSEEEIGGLKEMFKMIDVDNSGHITLEELKNGLEKVGSNLKDSEILGLMQAADVDSSGTIDYGEFVAAMLHMNKIQKEDHLFAAFNYFDKDGSGYITQDELQQVCQQFGFEESHLDDLICEVDQDKDGRIDYNEFVDMMQDANFGKMGLAC* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01480 580 Gene3D Phosphorylase Kinase; domain 1 134 217 - -
Pte18g01480 580 Gene3D Transferase(Phosphotransferase) domain 1 218 395 - -
Pte18g01480 580 FunFam Calcium-dependent protein kinase 1 398 572 - -
Pte18g01480 580 CDD EFh 509 569 IPR002048 GO:0005509
Pte18g01480 580 Pfam EF-hand domain pair 508 569 IPR002048 GO:0005509
Pte18g01480 580 Pfam EF-hand domain pair 438 498 IPR002048 GO:0005509
Pte18g01480 580 ProSitePatterns EF-hand calcium-binding domain. 446 458 IPR018247 -
Pte18g01480 580 Gene3D - 397 572 - -
Pte18g01480 580 SMART efh_1 437 465 IPR002048 GO:0005509
Pte18g01480 580 SMART efh_1 509 537 IPR002048 GO:0005509
Pte18g01480 580 SMART efh_1 543 571 IPR002048 GO:0005509
Pte18g01480 580 SMART efh_1 473 501 IPR002048 GO:0005509
Pte18g01480 580 SMART serkin_6 132 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01480 580 PANTHER SERINE/THREONINE-PROTEIN KINASE 125 564 - -
Pte18g01480 580 MobiDBLite consensus disorder prediction 23 106 - -
Pte18g01480 580 MobiDBLite consensus disorder prediction 40 57 - -
Pte18g01480 580 ProSiteProfiles EF-hand calcium-binding domain profile. 469 504 IPR002048 GO:0005509
Pte18g01480 580 SUPERFAMILY Protein kinase-like (PK-like) 132 391 IPR011009 -
Pte18g01480 580 ProSitePatterns Protein kinases ATP-binding region signature. 138 165 IPR017441 GO:0005524
Pte18g01480 580 ProSitePatterns EF-hand calcium-binding domain. 518 530 IPR018247 -
Pte18g01480 580 ProSitePatterns EF-hand calcium-binding domain. 552 564 IPR018247 -
Pte18g01480 580 ProSiteProfiles EF-hand calcium-binding domain profile. 541 574 IPR002048 GO:0005509
Pte18g01480 580 Pfam Protein kinase domain 132 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01480 580 SUPERFAMILY EF-hand 419 570 IPR011992 -
Pte18g01480 580 ProSiteProfiles EF-hand calcium-binding domain profile. 505 540 IPR002048 GO:0005509
Pte18g01480 580 FunFam Calcium-dependent protein kinase 1 134 217 - -
Pte18g01480 580 MobiDBLite consensus disorder prediction 80 99 - -
Pte18g01480 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Pte18g01480 580 ProSiteProfiles Protein kinase domain profile. 132 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01480 580 CDD STKc_CAMK 132 389 - -
Pte18g01480 580 ProSiteProfiles EF-hand calcium-binding domain profile. 433 468 IPR002048 GO:0005509
Pte18g01480 580 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Pte18g01480 580 FunFam Calcium-dependent protein kinase SK5 218 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01480 Pte-Chr18 26431557 26436577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01480 1 578 EF-hand Containing Proteins AT2G38910 70.995 0.0 876
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte18g01480 Pkinase 4.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01480 K13412 - mnt:21389869 915.605