Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01473 ATGGCAGCTGCGGTTGCTGTTGCGCCCAATCTTGATACTACCTTTGATGTATCAGAATCAAAGCAGACATACACCGACGTCAAGCTTTTCAATCGCTGGACTTTCGATGATGTTCAGGTAAACGATATGTCTCTTAATGATTATATTGGCGTGCAACCAACAAAGCATGCTACCTATGTCCCTCATACTGCTGGAAGGTATTCAGTCAAGCGCTTCCGGAAAGCCCAGTGCCCAATAGTTGAAAGACTGACAAACTCACTCATGATGCACGGAAGGAACAATGGAAAGAAACTTTTGGCTGTGAGGATTGTGAAGCATGCTATGGAAATTATCCATTTGTTGACTGATCAGAATCCCATTCAAATTATAGTTGATGCAATAGTCAACAGTGGTCCTCGTGAGGATGCAACTCGTATCGGTTCTGCTGGAGTTGTAAGGCGTCAAGCTGTGGATATTTCACCTTTGCGACGAGTGAATCAGGCTCTCTATCTTCTCACCACTGGTGCCCGTGAAGCCGCTTTTAGAAACATCAAGACCATTGCAGAATGCTTGGCCGATGAACTCATTAATGCAGCTAAGGGTTCATCCAACAGTTATGCGATCAAGAAGAAAGACGAGATTGAAAGAGTTGCCAAGGCTAATCGTTAG 648 0.4444 MAAAVAVAPNLDTTFDVSESKQTYTDVKLFNRWTFDDVQVNDMSLNDYIGVQPTKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLLAVRIVKHAMEIIHLLTDQNPIQIIVDAIVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQALYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01473 215 FunFam 40S ribosomal protein S5 12 215 - -
Pte18g01473 215 CDD uS7_Eukaryote 28 215 IPR005716 GO:0003735|GO:0006412|GO:0015935
Pte18g01473 215 ProSitePatterns Ribosomal protein S7 signature. 81 107 IPR020606 GO:0003723|GO:0003735|GO:0006412
Pte18g01473 215 NCBIfam 30S ribosomal protein S7 27 215 IPR005716 GO:0003735|GO:0006412|GO:0015935
Pte18g01473 215 Pfam Ribosomal protein S7p/S5e 69 215 IPR023798 -
Pte18g01473 215 PANTHER RIBOSOMAL PROTEIN S7 18 215 IPR000235 GO:0006412
Pte18g01473 215 SUPERFAMILY Ribosomal protein S7 28 215 IPR036823 -
Pte18g01473 215 Gene3D Ribosomal protein S7 domain 10 215 IPR036823 -
Pte18g01473 215 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 215 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01473 Pte-Chr18 26391879 26393416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01473 15 216 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 88.119 4.42e-135 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01473 K02989 - rcu:8285751 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01473 18 26391879 26393416 Pte18g01473 18 26391879 26393416 RCT