Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01470 ATGGCTACTGCAACGTACCCACCTCCGCCTCCTTTCTATAGACTCTACATAGATTACTTACAAAACTCTAAATCCGCTCCTGAACCTCCTCCTCCAATTGAAGGCATCTACGTTTGTTTTGGAGGCACCTACACTGTATATTTCAAGAAGGAACTAAGGTCGCTTAATAGAGAATTGCAATTGCACGTCCTAGAGCTTACTGATATTCTTGTTGAGAGGCCATCACAATATGCAAGAAGAGTGGAAGATATATCTGTTATATTCAAGAACTTGCATCACCTTCTAGTACGACCTCACCAGGCAAGAGCAACACTAATTCACATTCTAGAACTCCAAATACAACGAAGGAAACAAGCTGTTGAGGATATCAAGAGGTGTCCTATTTCAAAACCTTCCATAGATGTTTAA 408 0.4069 MATATYPPPPPFYRLYIDYLQNSKSAPEPPPPIEGIYVCFGGTYTVYFKKELRSLNRELQLHVLELTDILVERPSQYARRVEDISVIFKNLHHLLVRPHQARATLIHILELQIQRRKQAVEDIKRCPISKPSIDV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01470 135 Gene3D - 43 129 IPR044888 -
Pte18g01470 135 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 45 IPR009244 GO:0003712|GO:0006357|GO:0016592
Pte18g01470 135 SUPERFAMILY Mediator hinge subcomplex-like 46 125 IPR037212 GO:0016592
Pte18g01470 135 Pfam MED7 protein 46 125 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01470 Pte-Chr18 26342542 26343912 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Pte18g01470 Med7 2.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01470 K15148 - tcc:18599197 211.846