Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01467 ATGTTAGGCCGTTTGTATTTGTACCGCCGTTTTGGTTTACAGGTGCAAACATCTCACAACAACTATGCGATTTTCCTCTCGTCATTTAGCACCGCCGCTAAGACAAACGATGCTGACGATCGATCCGGTCCACCTCCGATTCGAGTCGGGTTTACAGAGTCAGCTGGGAGAGGCGTATTCGCCACTCGAAGAATCATGGCCGGTGATCTAGTCCACACGGCCAAACCAGCTGTGTGCCAACCTTCCCTTGCTGCCATCGACTCCGTCTGCTACTCATGTCTTCGGACGACAAACAAGTCGACCAACGCAGAACCTCCTGGCACGAGCATGCCGTTTTGTAGTCAAGACTGTAAAGAACGGTCCAAGGATTTTTATGCTGTGGATATGAGAGCAGATTGGACAGCGTTTGTTGACTATTGCCGGACTCAAGCATTGAAGTATCCGTTACTCGTAAAGCGATTGGCTTGCATGGTTATATCAGGAGCTGCAAATAGTGATAGCCTTGAGATTCTGCAACCTGCTAGTTTAAGCCCTGACATGATGTTAGAGATGGAGCAGGGATTTCTGCTGCTACGAGATGCCTTCGAGAAGGCACATGTAACAGAAGAAAGCATTGCTTTTTTAACCAAGCAATGGTACATAAATATTCTGGCACGAATGCGAATCAATGCATTCCGAATTGAATTGATTGGAGGACTGTATGAAGATCTTCTTTCATCAGCTGTTGCGTCTATTGAAGCTGAAGCAGCTGTCGGAAGTGCTGTATACATACTTCCATCTTTCTATAACCATGACTGTGATCCAAATGCACATATTGTATGGATAGACAATGCAGATGCAAGATTGAAGGCTCTTCGTGATGTTAATGCAGATGAAGAACTGAGAATCTGCTACATCGACGCGAGCATGGATCGTGATGCAAGACGAACACTTTTGTTTCAAGGTTTTGGTTTCCATTGCAAATGTGATAGATGCTTGAGTGGTGACTAG 990 0.4566 MLGRLYLYRRFGLQVQTSHNNYAIFLSSFSTAAKTNDADDRSGPPPIRVGFTESAGRGVFATRRIMAGDLVHTAKPAVCQPSLAAIDSVCYSCLRTTNKSTNAEPPGTSMPFCSQDCKERSKDFYAVDMRADWTAFVDYCRTQALKYPLLVKRLACMVISGAANSDSLEILQPASLSPDMMLEMEQGFLLLRDAFEKAHVTEESIAFLTKQWYINILARMRINAFRIELIGGLYEDLLSSAVASIEAEAAVGSAVYILPSFYNHDCDPNAHIVWIDNADARLKALRDVNADEELRICYIDASMDRDARRTLLFQGFGFHCKCDRCLSGD* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01467 329 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 43 327 - -
Pte18g01467 329 SMART set_7 45 305 IPR001214 GO:0005515
Pte18g01467 329 Pfam SET domain 56 298 IPR001214 GO:0005515
Pte18g01467 329 SUPERFAMILY SET domain 45 323 IPR046341 -
Pte18g01467 329 Coils Coil 275 295 - -
Pte18g01467 329 Gene3D - 143 224 - -
Pte18g01467 329 Gene3D SET domain 58 325 IPR046341 -
Pte18g01467 329 ProSiteProfiles SET domain profile. 45 299 IPR001214 GO:0005515
Pte18g01467 329 CDD SET_SMYD 238 325 - -
Pte18g01467 329 Gene3D - 89 142 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte18g01467 SET 3.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01467 - - qsa:O6P43_009439 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01467 18 26332153 26334656 Pte18g01467 18 26332153 26334656 RCT