Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01458 ATGTTAATGGAGAAGAGTAGTGAGAGAGAGACTCGTGACTTCATGAACGTTGAATCTTTCTCCCAACTCCCATTTATCCGACCAGCACCGATAAAAGAAAAGGCAGCTGGTATAAAGCTTTTCGGTATAGAATTTGGTAGCGTTGATACTACTAGTCCTGCCATCGTGACCGACGAAGAGGCCGAATCTGCCGAGACAGCAACAAATGCATTTGATGCTGACACTAAGGACGGAAACAGTACTGCCGAAAACAGCGAAAGCAACCGTAGATTCGAATGTCACTACTGTTGCAGAAGCTTCCCCACATCTCAAGCCTTAGGTGGTCACCAGAACGCTCACAAGAGAGAGAGGCAGCATGCGAAAAGAGCACACCTCCAGTCAGCCATGGTGCCCAGCAGCTTCTCCGAGTCCCACGTCTATGGCCTCATGAACTACAGGCTGAATTCAGTCTCAACTCCCACCATGACATACCCTACTTGGAACAGTAGTAGCTCCAGTAACATCTCTAATGGTCATGGGAGAATTCATGGAGGTTGTCGGGTCTGCAGGTTCGCAAAGCCGGAATAG 567 0.4868 MLMEKSSERETRDFMNVESFSQLPFIRPAPIKEKAAGIKLFGIEFGSVDTTSPAIVTDEEAESAETATNAFDADTKDGNSTAENSESNRRFECHYCCRSFPTSQALGGHQNAHKRERQHAKRAHLQSAMVPSSFSESHVYGLMNYRLNSVSTPTMTYPTWNSSSSSNISNGHGRIHGGCRVCRFAKPE* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01458 188 MobiDBLite consensus disorder prediction 59 85 - -
Pte18g01458 188 Gene3D Classic Zinc Finger 64 139 - -
Pte18g01458 188 PANTHER ZINC FINGER PROTEIN GIS 3 166 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Pte18g01458 188 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Pte18g01458 188 SUPERFAMILY beta-beta-alpha zinc fingers 88 119 IPR036236 -
Pte18g01458 188 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Pte18g01458 188 Pfam C2H2-type zinc finger 90 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01458 Pte-Chr18 26263721 26265839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01458 2 171 C2H2 Transcription Factor Family AT2G41940 45.455 5.90e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01458 - - cave:132192149 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01458 18 26263721 26265839 Pte18g01458 18 26263721 26265839 RCT