Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte18g01451 | ATGGGAGACGAGACAGTTGATGCAATGAATCTGGACTTAAACCTCGGTCCAGCTCCGGAGCCAGCTGTAGGCTCAGCTCCAAATCAGCCTGTGATTTTTGATGATTGGATCGATGATCCTACTTATAGATGGAGTGAAACTATGAGGCATAGAGCTCCACAAAGGCGGAGATGGCGTCAGCTTCATACAATGCCTCAATCTCAAGGCATTGCAATGGAATTAAATCAGCTCTTGATCAACTCTGGCAATGGTAGTATGTTACAAGTGGGTGAAGGTAGTGTGGCAGCTGAGGGAAGAACTGAAGAGGTACCTAAAACTTGCGATAATACAGGTGTCACTGTAGAAAAGACTTCAGAGGACAAGGCGGATGTTGAAAAGTGTGATGTCAATGATGGGAGCTTTTTTGACTGTAATATTTGTCTGGACTTGGCTAAGGATCCTGTTGTGACTTGTTGCGGTCACTTGTTTTGCTGGTCTTGCCTTTACCGATGGTTACATGTGCATTCTGATGCTAAGGAGTGTCCAGTATGCAAGGGAGAGGTTACAACAAAAAACGTGACTCCTATATATGGTCGTGGGAATTATAGGATGGAATCTGAGGAGGATCCTAGTCTTAAAATCCCTCGTCGGCCCCAAGCAAGGCGTGTCGAGAGTTTGAGGCAAACCATTCAGAGGAATGCATCAGTGCCCCCTGTGGAGGAGATGATTCGTCGTCTTGGTAGCAGAATTGACCTTCGGGATGTTGTGCAGCCCAATGAACTGGATGTCCGTGAATCAGCCGAAAGAAGAACTTCACTGTTGAATAGGTTTTTGACATCTCGAGGACTTCGAAGAGAACAAAATCAGGGTGCCAGCCCTGACGAAGTGGTTGATTTAACTCAAAGTGGCCCTGGTGATAACCACAGGGTTCAGTCTGTACTTTTACAGAGAGCACGCGCACCAAGAACAAATCCTACGTCCCTGTCATCTGCATTAAATTCTGCTGAAAGGTTAGTCGATGCATACTTCCGTAGCCATCATATAGGTAGGAACCAAGAGCAGGCTCCTCCTACTGTCGATGATCGTGATTCCTATTCGAGCATTGGTGTTGTTATAAACTCTGAGAGTCAAATGGACACTGCTATGGAGATAGATTCCCTTGTATCTCTATCGACCTCCTCTTCAAGAAGAAGAGCTGACGCGTCCAGAGTATCTGATGTGGATACTGGAGATTCTCGTGCACCCAGAAGGAGAAGGTTAAATCGAGAATAG | 1251 | 0.4604 | MGDETVDAMNLDLNLGPAPEPAVGSAPNQPVIFDDWIDDPTYRWSETMRHRAPQRRRWRQLHTMPQSQGIAMELNQLLINSGNGSMLQVGEGSVAAEGRTEEVPKTCDNTGVTVEKTSEDKADVEKCDVNDGSFFDCNICLDLAKDPVVTCCGHLFCWSCLYRWLHVHSDAKECPVCKGEVTTKNVTPIYGRGNYRMESEEDPSLKIPRRPQARRVESLRQTIQRNASVPPVEEMIRRLGSRIDLRDVVQPNELDVRESAERRTSLLNRFLTSRGLRREQNQGASPDEVVDLTQSGPGDNHRVQSVLLQRARAPRTNPTSLSSALNSAERLVDAYFRSHHIGRNQEQAPPTVDDRDSYSSIGVVINSESQMDTAMEIDSLVSLSTSSSRRRADASRVSDVDTGDSRAPRRRRLNRE* | 417 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte18g01451 | 416 | FunFam | Zinc finger family protein | 118 | 191 | - | - | |
Pte18g01451 | 416 | SUPERFAMILY | RING/U-box | 133 | 190 | - | - | |
Pte18g01451 | 416 | MobiDBLite | consensus disorder prediction | 277 | 300 | - | - | |
Pte18g01451 | 416 | MobiDBLite | consensus disorder prediction | 392 | 416 | - | - | |
Pte18g01451 | 416 | MobiDBLite | consensus disorder prediction | 382 | 416 | - | - | |
Pte18g01451 | 416 | Pfam | Zinc finger, C3HC4 type (RING finger) | 137 | 177 | - | - | |
Pte18g01451 | 416 | SMART | ring_2 | 137 | 177 | IPR001841 | - | |
Pte18g01451 | 416 | ProSiteProfiles | Zinc finger RING-type profile. | 137 | 178 | IPR001841 | - | |
Pte18g01451 | 416 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 102 | 228 | IPR013083 | - | |
Pte18g01451 | 416 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 107 | 318 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Pte18g01451 | 416 | CDD | RING-HC_AtRMA-like | 135 | 178 | - | - | |
Pte18g01451 | 416 | ProSitePatterns | Zinc finger RING-type signature. | 152 | 161 | IPR017907 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte18g01451 | Pte-Chr18 | 26192957 | 26195542 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte18g01451 | 1 | 405 | C3H Transcription Factor Family | AT3G58030 | 52.064 | 2.88e-130 | 380 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte18g01451 | K10666 | - | qsa:O6P43_005826 | 524.242 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte18g01451 | 18 | 26192957 | 26195542 | Pte18g01451 | 18 | 26192957 | 26195542 | RCT |