Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01448 ATGCTTATCCTCTTTCACCAATTGAATAAGCATATAAACAATTCTTCAGTTTTCTATTTGCACTGCCCATTCAGAATTCTCAACTTCATTGATACATTCTCAACTGTTTCCTACACTCCATCACAGGTCTTGCTCAGACATCCGATTGTATCTGCTTGCTTGCGACCGGTCAGGCGATATGCCCGTATGAGCAAGGATGATGCTTTTGAAGACTTATCGTCCATTGAAGAAGACTCGCTGCTTTGGTACAAGGATCTCGAGAAGCACTCATGTGGTGAATTCTCATTCGCTGTTGTGCAGGCCAACAGCGTTATCGAGGACCATAGTCAGGTGGAGACTGGCGCTCATGCCACCTTCATCGGAGTGTACGACGGCCACGGCGGCCCAGATGCCTCTCGCTACATCTGTGACCATTTATTTCGTCATCTAACGAGAATTGCCAGAGAACATGGAAGTATATCTGAAGATATACTCAGACATGCTGTTTCTGCAACTGAAGACGGTTTTCTTGCGCTTGTAAGAAGAACTTGGGGCTTAAAACCAGTGATTGCAGCCGTTGGTTCTTGCTGTCTAGTTGGAATTATTTGGAAAGGAACACTCTACGTTGCTAATATCGGAGATTCTCGTGCAGTTATCGGTTTTATAGGTAGGTCAAACACTATATTGGCAGAGCAATTGACCAAGGAGCACAATGCAAGCCTGGAAGAGGTTAGACTGGAACTCAAATCTTTGCATCCGGAAGATTCACAAATTGTCGTCTTGAAGCAGGGAACTTGGCGCATTAAAGGCATCATTCAGGTATCCAGATCTATAGGCGACGCATACTTGAAGAGGCCGGAATTTTGTCTCGATCCTTCATTCCCTCGATTCAACCTATCTGAACCCATTCGCCGGCCTGTGCTTACTGCAGAACCATCATTGTGTGCACGCGTTTTGCAGCCAAGTGACAGATTTCTTATATTTGCATCTGATGGACTTTGGGAGCACTTAACAAATCAACAAGCTGTAGAGATAGTTCATAATAACCCCCGGGAGGGTATTGCCAAAAGGCTTCTCAAAGCCGCCTTGAGTGTGGCAGCTAGTAAGAGGGAAATGCGTTATAGAGATCTTAAGGCAGTAGAGAAGGGAACAAGACGCTTTTTCCATGATGATATTACCGTTGTTGTAATCTTTATAGAACATGCATTGCTGGGAGAAAATCTTTCTGTACCTGAGTTATCCATCAAAGGGTTTGCCGACACTGTTGGCCCATCAAATTTTGAAATTCTCAGGAACTTGGCTTGA 1284 0.4455 MLILFHQLNKHINNSSVFYLHCPFRILNFIDTFSTVSYTPSQVLLRHPIVSACLRPVRRYARMSKDDAFEDLSSIEEDSLLWYKDLEKHSCGEFSFAVVQANSVIEDHSQVETGAHATFIGVYDGHGGPDASRYICDHLFRHLTRIAREHGSISEDILRHAVSATEDGFLALVRRTWGLKPVIAAVGSCCLVGIIWKGTLYVANIGDSRAVIGFIGRSNTILAEQLTKEHNASLEEVRLELKSLHPEDSQIVVLKQGTWRIKGIIQVSRSIGDAYLKRPEFCLDPSFPRFNLSEPIRRPVLTAEPSLCARVLQPSDRFLIFASDGLWEHLTNQQAVEIVHNNPREGIAKRLLKAALSVAASKREMRYRDLKAVEKGTRRFFHDDITVVVIFIEHALLGENLSVPELSIKGFADTVGPSNFEILRNLA* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01448 427 Gene3D - 60 399 IPR036457 -
Pte18g01448 427 FunFam Probable protein phosphatase 2C 42 84 400 - -
Pte18g01448 427 CDD PP2Cc 94 392 IPR001932 -
Pte18g01448 427 Pfam Protein phosphatase 2C 108 360 IPR001932 -
Pte18g01448 427 ProSitePatterns PPM-type phosphatase domain signature. 119 127 IPR000222 GO:0043169
Pte18g01448 427 SUPERFAMILY PP2C-like 100 393 IPR036457 -
Pte18g01448 427 ProSiteProfiles PPM-type phosphatase domain profile. 93 392 IPR001932 -
Pte18g01448 427 PANTHER PROTEIN PHOSPHATASE 77 390 IPR015655 GO:0004722|GO:0006470
Pte18g01448 427 SMART PP2C_4 87 390 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01448 Pte-Chr18 26169177 26172339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01448 53 423 PP2C-type Phosphatase Gene Family AT5G06750 69.737 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01448 K01102 - qsa:O6P43_005836 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01448 18 26169177 26172339 Pte18g01448 18 26169177 26172339 RCT