Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01440 ATGATTCGCGGGAAAAAGAGGAGAGAGTCCTTGCTTCTTACTATCCTTGTCTTCTTAGTGATTCTGACTTTTCAGGGTTCATCTTTTACCAATCCTCTTGATGTCTTAGCTCTTCAAGATCTTTACAAGACGCTGAACTTTCCACCAGAGCTCACGGGTTGGAGACAGAACGGTGGTGATCCTTGTGACGAGGCATGGGCAGGAGTGGCTTGTTCTGACTCCTCAATTCTGCATCTGAACATTCAAGGTCTTAACCTCTCTGGGTATCTGGGAGGCGGTCTACATAATCTGAATCACTTGAAACAACTTGATATCAGCTCCAATAACATCTGGGGTGAGATACCGTATGAGTTACCTCCTAATGCAACACATATAACCTCACTTTCATCTGCTTCCAGGAATTTAAGCCACAACGCACTATCTGGACCCGTTAGTGATGTGTTTTCTGGGTTGGACAATTTAAACGAGATGGATCTATCGTACAATAATTTCACAGGACATCTGCCTAGCTCTGTAGCTTCCTTGACGAAGCTTACTCGACTATTCTTGGAACGAAACAAATTCTCTGGATCTGTCACTTACCTGACTAAACTTCCACTAACTGATTTGATTGGGGGGAACAAATTTGAAATCGAATATAACTATCCACCGTGGGATTTTCCTGTGGACACCGTATCAGTAGGGAAAAATATCAGTGTTCCTCCAACAAACCATTCAAGTGCCACCAAGAACTACCCCTCTCTGAGAGATAGTGAGCACGAAAAGGGAAGTATAGGTGGCGGAGGAATAGCTTCTGTAGTTAGTGGAGTAGTCCTCACGGTAACAGGTGCGGCAATCTTTATAGCTCTTCGCAAGAAAATAAAACGCGCAGAAAAGCACAACGGTTTAGCAGGCAGCGACAGCTCACTGGAAAATCTTCCAATCAGCACACCGCCAGATTGCTCTTTGGCTGCACCGGAAGATAACTTCCAAGAGCCAGCTTTGAATTCTTCTCCTCTTCTTCCTCCAAAACCATTACCTCCAGTATGTGGCACCAGAAATAATAAGAAGTCGAAAAAAAGTTCTGTAAGGAAGTGTAGATTCCTCGAAAAAGCAAAAGGTTATACATTTGCAGAACTTCAGTCAGCTACTAGAAATTTCAGTCCTGACAACCTTCTAGTAGAAGGATTTCTTGGATCTGTTTACAAGGCTGAATTTTCAGATGGCCAGGTTTTGGCTGTAAAGAATGTCAACATGGCTGGGCTGCATCCTGACGAAGAGGAACAGTTCTTGGATGCTATCTGCACGACTTCCCGTCTGAGACACCCAAACATTTTATCTCTTAAAGGTTACTGTATAGCTCATGGACACTATATCCTCGTTTATGAGTATGTGACAAACTTATCTCTAGATGAAGCTCTACACGGTGAAGCATGTAAGCCTCTGTCATGGATTCTCCGTCTAAGGATTGCCCTTGGTGTTGCTCAAGCATTGGACTACATGCATTGCCAATTCTCACCACCTATAGCACACAGCAACTTGAAGGCAGCCAACATCTTACTTGATGAAGACTTGATTCCTCGTGTCTGCGACTGCGGGCTTGCTATCTTAAAACCATTAATTAGCGGCAAAATTAAAACCAAAGGTACTGAGATTTTTACCAGTGACACTAGCCTCATTGCCCCTGAACATGGTGAATCAGTGTTTGCAAACATAAAGAGCGACATCTATGCCTTCGGGGAGCTGCTTTTGGAATTGCTAACAGGAAGGAAACCCTTCGATAACTCAAAGCGAAAGGCGGAGCAATCTCTGGTAAGATGGGCTTCATTCAGGCTTCACGATAGCGGATTTTTAGAGCAGATGGTGGATCCCAACATGAAAAGGACATTTTCTTCCAAGGACCTCTCTCGTTATGCTGATATCGTTTCACTCTGTGTGCAGCCCCTAACAGAATACAGACCTCCAATTTCTGAGATTGTGGAATCTCTCACATCATTATTGCAAAACCACTTGGGGGAAGCTACTGCAGGTGCAGGTAGTGCTGCATCAAACTGA 2034 0.44 MIRGKKRRESLLLTILVFLVILTFQGSSFTNPLDVLALQDLYKTLNFPPELTGWRQNGGDPCDEAWAGVACSDSSILHLNIQGLNLSGYLGGGLHNLNHLKQLDISSNNIWGEIPYELPPNATHITSLSSASRNLSHNALSGPVSDVFSGLDNLNEMDLSYNNFTGHLPSSVASLTKLTRLFLERNKFSGSVTYLTKLPLTDLIGGNKFEIEYNYPPWDFPVDTVSVGKNISVPPTNHSSATKNYPSLRDSEHEKGSIGGGGIASVVSGVVLTVTGAAIFIALRKKIKRAEKHNGLAGSDSSLENLPISTPPDCSLAAPEDNFQEPALNSSPLLPPKPLPPVCGTRNNKKSKKSSVRKCRFLEKAKGYTFAELQSATRNFSPDNLLVEGFLGSVYKAEFSDGQVLAVKNVNMAGLHPDEEEQFLDAICTTSRLRHPNILSLKGYCIAHGHYILVYEYVTNLSLDEALHGEACKPLSWILRLRIALGVAQALDYMHCQFSPPIAHSNLKAANILLDEDLIPRVCDCGLAILKPLISGKIKTKGTEIFTSDTSLIAPEHGESVFANIKSDIYAFGELLLELLTGRKPFDNSKRKAEQSLVRWASFRLHDSGFLEQMVDPNMKRTFSSKDLSRYADIVSLCVQPLTEYRPPISEIVESLTSLLQNHLGEATAGAGSAASN* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01440 677 MobiDBLite consensus disorder prediction 233 256 - -
Pte18g01440 677 Gene3D Ribonuclease Inhibitor 31 218 IPR032675 -
Pte18g01440 677 Pfam Leucine rich repeat 134 188 IPR001611 GO:0005515
Pte18g01440 677 ProSiteProfiles Protein kinase domain profile. 380 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01440 677 Pfam Protein tyrosine and serine/threonine kinase 385 656 IPR001245 GO:0004672|GO:0006468
Pte18g01440 677 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 31 212 - -
Pte18g01440 677 SUPERFAMILY L domain-like 31 198 - -
Pte18g01440 677 MobiDBLite consensus disorder prediction 295 355 - -
Pte18g01440 677 FunFam Leucine-rich repeat receptor-like protein kinase 458 667 - -
Pte18g01440 677 SUPERFAMILY Protein kinase-like (PK-like) 358 656 IPR011009 -
Pte18g01440 677 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 345 457 - -
Pte18g01440 677 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Pte18g01440 677 Gene3D Phosphorylase Kinase; domain 1 342 457 - -
Pte18g01440 677 Gene3D Transferase(Phosphotransferase) domain 1 458 670 - -
Pte18g01440 677 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 660 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01440 Pte-Chr18 26126844 26131594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01440 5 672 Strubbelig Receptor Gene Family AT5G06820 48.257 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pte18g01440 PK_Tyr_Ser-Thr 1.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01440 - - qsa:O6P43_010197 755.362