LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte18g01440	ATGATTCGCGGGAAAAAGAGGAGAGAGTCCTTGCTTCTTACTATCCTTGTCTTCTTAGTGATTCTGACTTTTCAGGGTTCATCTTTTACCAATCCTCTTGATGTCTTAGCTCTTCAAGATCTTTACAAGACGCTGAACTTTCCACCAGAGCTCACGGGTTGGAGACAGAACGGTGGTGATCCTTGTGACGAGGCATGGGCAGGAGTGGCTTGTTCTGACTCCTCAATTCTGCATCTGAACATTCAAGGTCTTAACCTCTCTGGGTATCTGGGAGGCGGTCTACATAATCTGAATCACTTGAAACAACTTGATATCAGCTCCAATAACATCTGGGGTGAGATACCGTATGAGTTACCTCCTAATGCAACACATATAACCTCACTTTCATCTGCTTCCAGGAATTTAAGCCACAACGCACTATCTGGACCCGTTAGTGATGTGTTTTCTGGGTTGGACAATTTAAACGAGATGGATCTATCGTACAATAATTTCACAGGACATCTGCCTAGCTCTGTAGCTTCCTTGACGAAGCTTACTCGACTATTCTTGGAACGAAACAAATTCTCTGGATCTGTCACTTACCTGACTAAACTTCCACTAACTGATTTGATTGGGGGGAACAAATTTGAAATCGAATATAACTATCCACCGTGGGATTTTCCTGTGGACACCGTATCAGTAGGGAAAAATATCAGTGTTCCTCCAACAAACCATTCAAGTGCCACCAAGAACTACCCCTCTCTGAGAGATAGTGAGCACGAAAAGGGAAGTATAGGTGGCGGAGGAATAGCTTCTGTAGTTAGTGGAGTAGTCCTCACGGTAACAGGTGCGGCAATCTTTATAGCTCTTCGCAAGAAAATAAAACGCGCAGAAAAGCACAACGGTTTAGCAGGCAGCGACAGCTCACTGGAAAATCTTCCAATCAGCACACCGCCAGATTGCTCTTTGGCTGCACCGGAAGATAACTTCCAAGAGCCAGCTTTGAATTCTTCTCCTCTTCTTCCTCCAAAACCATTACCTCCAGTATGTGGCACCAGAAATAATAAGAAGTCGAAAAAAAGTTCTGTAAGGAAGTGTAGATTCCTCGAAAAAGCAAAAGGTTATACATTTGCAGAACTTCAGTCAGCTACTAGAAATTTCAGTCCTGACAACCTTCTAGTAGAAGGATTTCTTGGATCTGTTTACAAGGCTGAATTTTCAGATGGCCAGGTTTTGGCTGTAAAGAATGTCAACATGGCTGGGCTGCATCCTGACGAAGAGGAACAGTTCTTGGATGCTATCTGCACGACTTCCCGTCTGAGACACCCAAACATTTTATCTCTTAAAGGTTACTGTATAGCTCATGGACACTATATCCTCGTTTATGAGTATGTGACAAACTTATCTCTAGATGAAGCTCTACACGGTGAAGCATGTAAGCCTCTGTCATGGATTCTCCGTCTAAGGATTGCCCTTGGTGTTGCTCAAGCATTGGACTACATGCATTGCCAATTCTCACCACCTATAGCACACAGCAACTTGAAGGCAGCCAACATCTTACTTGATGAAGACTTGATTCCTCGTGTCTGCGACTGCGGGCTTGCTATCTTAAAACCATTAATTAGCGGCAAAATTAAAACCAAAGGTACTGAGATTTTTACCAGTGACACTAGCCTCATTGCCCCTGAACATGGTGAATCAGTGTTTGCAAACATAAAGAGCGACATCTATGCCTTCGGGGAGCTGCTTTTGGAATTGCTAACAGGAAGGAAACCCTTCGATAACTCAAAGCGAAAGGCGGAGCAATCTCTGGTAAGATGGGCTTCATTCAGGCTTCACGATAGCGGATTTTTAGAGCAGATGGTGGATCCCAACATGAAAAGGACATTTTCTTCCAAGGACCTCTCTCGTTATGCTGATATCGTTTCACTCTGTGTGCAGCCCCTAACAGAATACAGACCTCCAATTTCTGAGATTGTGGAATCTCTCACATCATTATTGCAAAACCACTTGGGGGAAGCTACTGCAGGTGCAGGTAGTGCTGCATCAAACTGA	2034	0.44	MIRGKKRRESLLLTILVFLVILTFQGSSFTNPLDVLALQDLYKTLNFPPELTGWRQNGGDPCDEAWAGVACSDSSILHLNIQGLNLSGYLGGGLHNLNHLKQLDISSNNIWGEIPYELPPNATHITSLSSASRNLSHNALSGPVSDVFSGLDNLNEMDLSYNNFTGHLPSSVASLTKLTRLFLERNKFSGSVTYLTKLPLTDLIGGNKFEIEYNYPPWDFPVDTVSVGKNISVPPTNHSSATKNYPSLRDSEHEKGSIGGGGIASVVSGVVLTVTGAAIFIALRKKIKRAEKHNGLAGSDSSLENLPISTPPDCSLAAPEDNFQEPALNSSPLLPPKPLPPVCGTRNNKKSKKSSVRKCRFLEKAKGYTFAELQSATRNFSPDNLLVEGFLGSVYKAEFSDGQVLAVKNVNMAGLHPDEEEQFLDAICTTSRLRHPNILSLKGYCIAHGHYILVYEYVTNLSLDEALHGEACKPLSWILRLRIALGVAQALDYMHCQFSPPIAHSNLKAANILLDEDLIPRVCDCGLAILKPLISGKIKTKGTEIFTSDTSLIAPEHGESVFANIKSDIYAFGELLLELLTGRKPFDNSKRKAEQSLVRWASFRLHDSGFLEQMVDPNMKRTFSSKDLSRYADIVSLCVQPLTEYRPPISEIVESLTSLLQNHLGEATAGAGSAASN*	678

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pte18g01440	677	MobiDBLite	consensus disorder prediction	233	256	-	-
Pte18g01440	677	Gene3D	Ribonuclease Inhibitor	31	218	IPR032675	-
Pte18g01440	677	Pfam	Leucine rich repeat	134	188	IPR001611	GO:0005515
Pte18g01440	677	ProSiteProfiles	Protein kinase domain profile.	380	660	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pte18g01440	677	Pfam	Protein tyrosine and serine/threonine kinase	385	656	IPR001245	GO:0004672\|GO:0006468
Pte18g01440	677	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 3	31	212	-	-
Pte18g01440	677	SUPERFAMILY	L domain-like	31	198	-	-
Pte18g01440	677	MobiDBLite	consensus disorder prediction	295	355	-	-
Pte18g01440	677	FunFam	Leucine-rich repeat receptor-like protein kinase	458	667	-	-
Pte18g01440	677	SUPERFAMILY	Protein kinase-like (PK-like)	358	656	IPR011009	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte18g01440	Pte-Chr18	26126844	26131594	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte18g01440	5	672	Strubbelig Receptor Gene Family	AT5G06820	48.257	0.0	586

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Pte18g01440		PK_Tyr_Ser-Thr	1.8e-29	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte18g01440	-		-	qsa:O6P43_010197	755.362

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