Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01439 ATGGCAGCGATCGGTTGCTGCTTTTGTACTTCAACTTCGACAAGCAACTTAGGGTTATGGAAGACATCAAAGTCATGGTTGGTAATCAAAACTCAGAGTGCAAAGACCATTCCAGGGAAACTTTATAGGGGGAGGTTGAGAATAGGAGCCCAAGTTAAGTTCGTAAATGCGGATGAAGCCAAGACACTCGTAGCTGTCGACGGATATACAATTCTGGATGTAAGGGATAAATCTCAATTCGACAGAGCTCATATCAAATCATGTTATCAAGTTCCGCTTTTCATTGAAAATCGAGACAATGACCTTGGTACAATTGTGAAGAGGACTCTGCACAATAATTTTTCTGGATTGTTCTTTGGGCTGCCATTTACTAAACTAAACCCTGATTTTTTGCAAACTATTAGCAGCCAATTTTCACCAGAGAGTAAAATTTTGGTGGTGTGCCAAGAAGGTCTCAGGTCTACAGCTGCTGCCAATAAGTTAGACCAAGCTGGCTACAAAAATGTAGCATGCATAACTTCAGGCCTTCAATCTGTAAAGCCAGGAACTTTCGACACTGTTGGCTCCACTGAGTTGCAGGATGCTGGCAAAGCTGGCCTAGTTACCATCCAAGGGAAAGTTTCAGCTGTACTGGGGACCGTTCTCGTCTGTGCATATCTATTCATCACGTTCTTCCCACAGCAAGCAGAGAAGCTCCTTCAAATGGTCCCTGCAGGCTAG 720 0.4375 MAAIGCCFCTSTSTSNLGLWKTSKSWLVIKTQSAKTIPGKLYRGRLRIGAQVKFVNADEAKTLVAVDGYTILDVRDKSQFDRAHIKSCYQVPLFIENRDNDLGTIVKRTLHNNFSGLFFGLPFTKLNPDFLQTISSQFSPESKILVVCQEGLRSTAAANKLDQAGYKNVACITSGLQSVKPGTFDTVGSTELQDAGKAGLVTIQGKVSAVLGTVLVCAYLFITFFPQQAEKLLQMVPAG* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01439 239 SMART rhod_4 55 185 IPR001763 -
Pte18g01439 239 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 42 184 - -
Pte18g01439 239 Gene3D - 46 185 IPR036873 -
Pte18g01439 239 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 51 177 IPR036873 -
Pte18g01439 239 Pfam Rhodanese-like domain 57 179 IPR001763 -
Pte18g01439 239 CDD RHOD 59 180 - -
Pte18g01439 239 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 238 IPR044615 -
Pte18g01439 239 ProSiteProfiles Rhodanese domain profile. 65 188 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01439 Pte-Chr18 26115085 26117677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01439 14 233 Sulfurtransferasese or Rhodanese AT2G42220 67.117 3.75e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01439 - - adu:107492903 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01439 18 26115085 26117677 Pte18g01439 18 26115085 26117677 RCT