Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01438 ATGTTTTCCAAAGCTGTACAATTAATATCCCATATGAAGCACATTGCAGTTAGCAGAGCAGAAGAACAAGTAGAGAAGAAGGAGGAGGAACTACGAAAGCTTCTAGGATCTTCGTCGATGGCTTCCAATATTAAAAACAGTCAGCTGTTAACGAGTCAGATGGAAAGCACTACAGCACCTCAACACCATCACAATCATCACTTTGTTCATCATCAACAGCTACAGGTGCAACATCAGCACCAACATCTACTTCATGAGCATCATCAAATTCCTTTTGGCATGATGCAATCTTCTTCATCTTCGTCCATCACTGGAAACTTCATGAAGGATACCGGAGCTTATGATATAGGAGAATTAGACCAGGCTGTTTTTCTATATCTAGATGGACAGGACCCCTCTACTGCACAAGACCAAAGACAGAACTCAGGATTAATGAGGCCACCAACTTTGAACATTTTTCCTTCTCAACCTATGCACGTGGAACCACCGTCCACAAAGGCGGCTAGTCTTATTAACTGTAGCTCCAAGAGACCAACAGAACCGTCGATGGAGTTGGCCAACGCAAGAAACAATCCTCCATCTAAGCCAGAACCAGCCAAAGCTGTCAAGCGAGAGAGCAACCGCAAGCGTCCGGCATCGAGCTCGGAGCATGAAGGACCTAAGACCCCTGACCCTAAGACACTAAGAAGACTTGCGCAGAATAGGGAAGCAGCCAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTGCAGCAGCTAGAGTCAAGTAGGATTAGACTTAATCAACTCGAGCATGAATTACAGCGGGCTAGAGCTCAGGGCATATTTTTTGGAGGAAGTGGTACTGTGGGAGCAGACCAGCAAGGACTTCCTGTCGCCGTGACCAACATTAGTTCAGATTCTGCAGTGTTTGATGTAGAATATGCAAAGTGGCTAGAGCAGCACCACCGTCTGATGTGCGAGCTAAGAGCTGCAGTACAAGAGCATCTCCCAGAAAATGAGCTTCGGCTGTTTGTGGACAATTGCTTAGCACACTACGACGAAATAATGAACCTAAAGAGCATGGTCGCCAAGGCAGATGTATTCCATCTCGTTTCTGGTATGTGGAAGACCCCAGCTGAACGTTGTTTCATGTGGATTGGTGGTTTCAGGCCCTCGGAAGTTATTAAGATTATTGTTAATCAAATTGAGCCCATGACTGAGCAACAACTGTTGGGTATATGTGCTTTACAGCAATCTACTCAAGAGGCCGAAGAAGCTCTATCGCAAGGGCTTGACGCTTTGAACCAGTCTCTAACAGAAACTATCACTTCGGATTCATTGACCTGTCCCCCTAATATGGGCAATTACATGGGGCAGATGGCAATTGCAATGAACAAGCTCTCTACCCTTGAAGGCTTCGTTAGACAGGCGGATAGTTTGAGGCACCAGACGATTCACCGGCTACATCAAATCCTCACAACGCGTCAGGCAGCTCGGTGTTTGTTGGCAATAGCCGAGTACTTCCATCGTCTCAGAGCCCTCAGTTCTCTATGGCAGTCACGTCCTCGACAAGAATGA 1557 0.4644 MFSKAVQLISHMKHIAVSRAEEQVEKKEEELRKLLGSSSMASNIKNSQLLTSQMESTTAPQHHHNHHFVHHQQLQVQHQHQHLLHEHHQIPFGMMQSSSSSSITGNFMKDTGAYDIGELDQAVFLYLDGQDPSTAQDQRQNSGLMRPPTLNIFPSQPMHVEPPSTKAASLINCSSKRPTEPSMELANARNNPPSKPEPAKAVKRESNRKRPASSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEHELQRARAQGIFFGGSGTVGADQQGLPVAVTNISSDSAVFDVEYAKWLEQHHRLMCELRAAVQEHLPENELRLFVDNCLAHYDEIMNLKSMVAKADVFHLVSGMWKTPAERCFMWIGGFRPSEVIKIIVNQIEPMTEQQLLGICALQQSTQEAEEALSQGLDALNQSLTETITSDSLTCPPNMGNYMGQMAIAMNKLSTLEGFVRQADSLRHQTIHRLHQILTTRQAARCLLAIAEYFHRLRALSSLWQSRPRQE* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01438 518 Coils Coil 245 272 - -
Pte18g01438 518 MobiDBLite consensus disorder prediction 167 189 - -
Pte18g01438 518 Coils Coil 17 37 - -
Pte18g01438 518 MobiDBLite consensus disorder prediction 198 229 - -
Pte18g01438 518 ProSiteProfiles DOG1 domain profile. 300 514 IPR025422 GO:0006351|GO:0043565
Pte18g01438 518 MobiDBLite consensus disorder prediction 132 229 - -
Pte18g01438 518 Pfam Seed dormancy control 318 392 IPR025422 GO:0006351|GO:0043565
Pte18g01438 518 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 224 268 IPR004827 GO:0003700|GO:0006355
Pte18g01438 518 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 229 244 IPR004827 GO:0003700|GO:0006355
Pte18g01438 518 PANTHER TRANSCRIPTION FACTOR TGA9 150 517 - -
Pte18g01438 518 FunFam BZIP family transcription factor 225 274 - -
Pte18g01438 518 CDD bZIP_HBP1b-like 226 278 - -
Pte18g01438 518 SMART brlzneu 222 302 IPR004827 GO:0003700|GO:0006355
Pte18g01438 518 SUPERFAMILY Leucine zipper domain 226 268 IPR046347 GO:0003700|GO:0006355
Pte18g01438 518 Pfam bZIP transcription factor 226 260 IPR004827 GO:0003700|GO:0006355
Pte18g01438 518 Gene3D - 225 274 - -
Pte18g01438 518 MobiDBLite consensus disorder prediction 132 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01438 Pte-Chr18 26093649 26100497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01438 105 518 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 64.865 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte18g01438 DOG1 2.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01438 K14431 - cave:132191929 716.072