Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01434 ATGGATTCCAGCACCCATCAGAACTACCCGCACCAGCATCATCAGTGTCACCCATCCAATTCAGGATTTTTGCGTTTTCGATCAGTTCCAAGTTCATTTCTTATTAATTCTACTGAACCTGTAATTGGAAGCAGTGGTCTAAGTAACTGCAATCCATGCGAGGCGTCTGAATCACGCAACTTGATGTCCAGATACGCAACCTGTTCCGATACCACTGATTCGGGTACGTCAAGTTTCCACGAGTTTGAGGAAAAACCATCCCCTGCAACATTCATCGAAGTTCCTCTCAAGCTTGTTAATCCTCCGCTAGGATGGAATGTGCTACCGCCTCATTATCCAAGACATAACCCTGCTTTGGATAGCTCCTTTGGAAAGGTTACTCCCATGGGAACGGATCACCACACTGACGCAAAAAGTTTCAGCTCGCCTGCTGGTCCTTTCACCAACATCCCTTTTCAAAACGGATATAACACTGTGAAAGGGTTTGGAATCTGCACTGGTGCTCATAGCAATATCGGTGAAGTAAGTCCATCTATGAACGAATTGAAGAGTCGAACTGATTGCTCTTCAAGAGCTCTTTCATCCTTGGGGGTGTTGTCACAGATCTCTGGAACGGTCAGTGAAAGCATCCATGGTATAAGTAGCCCTGAGGAAAATGAAAACTGCAAAACTCAATTTTATGGCGATGGGTCGACATATGGTGCTTGGAATGATTCATCCAATTTCTCAGACAATTTTGCTGGCTTGAAAAGACAGAGAAGTAACGAGGAGAAGATATTTTCTAGTTGTCAGCTTGAATCCCACCACTTGAGTCTGCCAAAGGCATCGGCTGGGATGATCTCTGTGGACAAGTTTCTTCCGTTCCAAGATTCTGTTCCTTGGAAAATCAGAGCAAAGCGTGGCTGTGCTACTCATCCTAGAAGCATTGCTGAAAGGGTGAGAAGAACTCGAATCAGTGAAAGGATGAGAAGGCTGCAGGAGCTCGTCCCAAAGATGGACAAGCAAACAAACACAGCAGACATGTTGGACTTGGCTGTCGAGTACATCAAAGATCTCCAGAAACAATTCAAAACGCTTAGGGATAATCGAGCAAAATGCACTTGTTCAAGAATGCAGAAGCAGGTTACGAGTCAAATAGTTTGA 1143 0.4479 MDSSTHQNYPHQHHQCHPSNSGFLRFRSVPSSFLINSTEPVIGSSGLSNCNPCEASESRNLMSRYATCSDTTDSGTSSFHEFEEKPSPATFIEVPLKLVNPPLGWNVLPPHYPRHNPALDSSFGKVTPMGTDHHTDAKSFSSPAGPFTNIPFQNGYNTVKGFGICTGAHSNIGEVSPSMNELKSRTDCSSRALSSLGVLSQISGTVSESIHGISSPEENENCKTQFYGDGSTYGAWNDSSNFSDNFAGLKRQRSNEEKIFSSCQLESHHLSLPKASAGMISVDKFLPFQDSVPWKIRAKRGCATHPRSIAERVRRTRISERMRRLQELVPKMDKQTNTADMLDLAVEYIKDLQKQFKTLRDNRAKCTCSRMQKQVTSQIV* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01434 380 FunFam Transcription factor bHLH130 family 303 373 - -
Pte18g01434 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 305 365 IPR036638 GO:0046983
Pte18g01434 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 302 352 IPR011598 GO:0046983
Pte18g01434 380 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 153 376 - -
Pte18g01434 380 SMART finulus 308 358 IPR011598 GO:0046983
Pte18g01434 380 Pfam Helix-loop-helix DNA-binding domain 307 353 IPR011598 GO:0046983
Pte18g01434 380 Gene3D - 303 377 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01434 Pte-Chr18 26062540 26065303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01434 1 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 43.557 3.71e-73 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte18g01434 HLH 4.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01434 - - qsa:O6P43_006556 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01434 18 26062540 26065303 Pte18g01434 18 26062540 26065303 RCT