Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01433 ATGCTTCGTCGGGTTCAGCTTGCTCTCTTTTTCATGTGCTTCTTAACTCCTCTCTGTGACTTTCTCAACTCAGACGGTCTAGCTCTCCTAGCTCTGAAAGCCGCCATCGAAAGCGATCCATTGGGTGCTCTCACTTCATGGTCTGATTCCGACTCATCTCCATGTCGCTGGCCTGGAGTCCTCTGCACCCACGACCGAGTTACTCAACTTTTCCTCGCTAACAGAGCTCTCAATGGCTACCTTCCCTCTGAGCTTGGTCTCCTTACCTCTCTCAAGCGACTTACACTCTCGCATAACAACTTCTCTCGCCTCATTCCTTCTCATCTATTCAATGCTACCGATCTCGTCATTCTCGACCTCTCTCACAACTCGCTCTCTGGTCTACTACCAACCCAGATCAAATCCCTCAAATCTCTCAGACACCTAGATTTATCGGCTAATTTCCTTAATGGGTCACTTCCAGAATCTTTGACTGAGCTCAGTTCCCTCACTGGAACACTTAACCTTTCATTCAATGGCTTCACCGGTGAGGTCCCTGTATCCTACGGTCGATTCCCTGTGATGGTCAGCTTGGATCTTCAGAACAATAATCTCACTGGAAAAATCCCTCAAGTAGGTTCGTTGGTGAACCAAGGACCTACTGCATTCTCAGGTAACCCAGGCCTTTGTGGCTTTCCGTTGCAAACTCCATGCCCAGAACAAGAAACTCAAAAACCAGAGTACTTCAATAGTACCCGAGACCCTCAAGACCCGAACCGGACTTTGCCAGGTGAGGCAGTTGAACCAGACAGGGAAAAATCTCAGGGAAGTGGTATTGTGACAGTCCCACTGATCTCCGGTATTTCTTTGATCGTCGGAGTTGTCTCATTGTCCGTGTGGTTGCTTCGGAGAAAGGGGTCATCTGCGGAGGGTAAACTGGGAAAAGAAAAATTCTCAGGAGCGACAGAGGACTTAGGGGGAGGGCAGAATAGTAAATTCGTAGTGCTGGATGAAGGGTTGAATCTTGAATTAGAGGATTTGTTGAGGGCATCAGCATACGTATTGGGAAAAGGCAGAAACGGAATCGTATACAAGGTGGTCGCTGTCGGGAGGGGATCCTGTGCAACTCCTTCTGTTGTCGCTGTCAGAAGATTGAGTGACGGTGATACCACATGGAAACTGAAGGAATTCCAATCAGAGGTAGAGATCATCGGCCGGGTCCAGCACCCGAACATCGTGCGGTTGAGAGCATATTATTATGCTCAAGATGAGAAACTGCTCGTCAGTGACTATGTCCGCAATGGAAGCTTGCACACTGCTTTACACGGGGGTCCTTCAAGTGCTCTGCCACCATTAACATGGACTGTGAGGTTAAGGATTATTCAAGGAACTGCTCGGGGTCTAATGTACATACACGAGTTCAGTCCTCGCAAGTACGTTCATGGCAACATAAAATCAACCAAAATCCTACTGGACGATGATCTCCAGCCTTTCATATCAGGTTTTGGACTTACTCGCCTTGGCTTAGGTACTGCCAAGTTTACTGCAGCCGCGTCGAAACGATATCACAGCACAAAACAGTCCACCATTGTAACCTCTACTATGGGATCGAAAGTAACGAATCACTCTATCCATTATTTGGCACCTGAATTACGTATTTCCGGTGCCAAATACACTCAGAAATGTGACGTGTATTCTTTAGGTATTGTGCTCTTGGAGATTTTAACTGGTAAGCTTCCAGGTTCAGGACCAGACGATGATGGCAAGGCACTGGAAGGATTTGTGAGGAAAGCATTTCGTGAAGAACGGCCATTGTCTGAGATTATAGATTCCGCACTACTGCATGAGGTGCATGCCAAGAAACAAGTTATTGCTGCGTTTCACATTGCACTTAATTGCACAGAACATGACCCAGAATTGCGTCCTCGGATGAAAACAGTATCGGATAGTCTTGATCGCATTATGTCTCAGTGA 1953 0.4721 MLRRVQLALFFMCFLTPLCDFLNSDGLALLALKAAIESDPLGALTSWSDSDSSPCRWPGVLCTHDRVTQLFLANRALNGYLPSELGLLTSLKRLTLSHNNFSRLIPSHLFNATDLVILDLSHNSLSGLLPTQIKSLKSLRHLDLSANFLNGSLPESLTELSSLTGTLNLSFNGFTGEVPVSYGRFPVMVSLDLQNNNLTGKIPQVGSLVNQGPTAFSGNPGLCGFPLQTPCPEQETQKPEYFNSTRDPQDPNRTLPGEAVEPDREKSQGSGIVTVPLISGISLIVGVVSLSVWLLRRKGSSAEGKLGKEKFSGATEDLGGGQNSKFVVLDEGLNLELEDLLRASAYVLGKGRNGIVYKVVAVGRGSCATPSVVAVRRLSDGDTTWKLKEFQSEVEIIGRVQHPNIVRLRAYYYAQDEKLLVSDYVRNGSLHTALHGGPSSALPPLTWTVRLRIIQGTARGLMYIHEFSPRKYVHGNIKSTKILLDDDLQPFISGFGLTRLGLGTAKFTAAASKRYHSTKQSTIVTSTMGSKVTNHSIHYLAPELRISGAKYTQKCDVYSLGIVLLEILTGKLPGSGPDDDGKALEGFVRKAFREERPLSEIIDSALLHEVHAKKQVIAAFHIALNCTEHDPELRPRMKTVSDSLDRIMSQ* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01433 650 Gene3D Ribonuclease Inhibitor 165 233 IPR032675 -
Pte18g01433 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 647 IPR046959 -
Pte18g01433 650 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Pte18g01433 650 Gene3D Ribonuclease Inhibitor 21 164 IPR032675 -
Pte18g01433 650 Pfam Protein kinase domain 347 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01433 650 ProSiteProfiles Protein kinase domain profile. 342 648 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01433 650 SUPERFAMILY L domain-like 22 228 - -
Pte18g01433 650 Gene3D Phosphorylase Kinase; domain 1 323 424 - -
Pte18g01433 650 SUPERFAMILY Protein kinase-like (PK-like) 347 646 IPR011009 -
Pte18g01433 650 MobiDBLite consensus disorder prediction 230 251 - -
Pte18g01433 650 FunFam Leucine-rich repeat receptor-like kinase 27 138 - -
Pte18g01433 650 MobiDBLite consensus disorder prediction 229 267 - -
Pte18g01433 650 SMART LRR_typ_2 136 160 IPR003591 -
Pte18g01433 650 SMART LRR_typ_2 88 112 IPR003591 -
Pte18g01433 650 Gene3D Transferase(Phosphotransferase) domain 1 425 650 - -
Pte18g01433 650 PRINTS Leucine-rich repeat signature 136 149 - -
Pte18g01433 650 PRINTS Leucine-rich repeat signature 115 128 - -
Pte18g01433 650 Pfam Leucine rich repeat 90 147 IPR001611 GO:0005515
Pte18g01433 650 FunFam Leucine-rich repeat receptor-like protein kinase 139 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01433 Pte-Chr18 26056677 26059883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01433 22 651 Receptor kinase-like Gene Family AT3G57830 59.317 0.0 755
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte18g01433 Pkinase 3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01433 - - qsa:O6P43_006555 866.685