Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01431 ATGGAGACAGCTGCACTTGGATCCAGCTGCCCAATTCTCCACCACGATGACTCTGCACTTGAATCCCTCCAATTCGGTGAAGGAATTCAGCGTCTGATAACAGCTCCGTCCGAGAACATGAGTTCCTTTACTGCCCTTCTTGAACTACCACCTACGCGAGCCATGGAGCTCCTTCACTCACAGGACTCTGATGGAGCGGCCAACATAGCCAGCATTCCTGGGAACCCAATTCAGCACCAAATCAACGAACTCAAACCCTATCCTTTTCATAACTTCACTGGCAATTTGACTTTCCCCACTAACGCCACTTTGATTGAACGGGCCGCCAAGTACTCGGTGTTCGCCGGAGGCAGCTCGCCAATGATGGAGGCAGCCAGCTCGGTTCCGTCTAACTCTAGCGAGACTTTCGATAAGGTGAAGAACGAGCCTACTGAAACTGTCTCCAACCCTAATTTGTCTCAGCCTCTGGGTTGCGATCCAACAGTGGAGAACAAGAACCAGAGACCGGCCAAGAGAAAGGAGCGTGAGAAGAAGGTTAGAGGGACCACGAAGAAGAACAAGAGCATCGCATTAGAGACCTCTGGGGACGGTGAGAAGCTTCCATACGTCCATGTCCGAGCTCGTCGTGGTCAAGCTACTGACAGCCATAGCTTGGCCGAGAGAGCAAGGAGAGAGAAAATAAATGCCAGGATGAAGCTTTTGCAGGAGCTGGTCCCCGGGTGTAATAAGATATCAGGTACTGCATTGGTTCTGGACGAAATCATCAATCATGTGCAATCTCTACAACGTCAAGTTGAGTTCTTATCCATGAAACTTGCAGCAATCAACCCAAGAATTGATTTTAATCTTGACAGTTTCTTGGCTACCGATGGTCCATTCCTAATGGATGGTAACTTCACTAACATGGTGCCACCTGCAGTACAGCCTGATATGTCATTCAGCGGAACCAGACAGCAATGTCAACCACATTGGCATTTTGATCCGTTCCATCAGACACTTTGGTGCAAGGAAGAAGAGAATCGTAATTTCATAAACCCAGAAAACTCACTCTTGAGCTATGATTCATCAGCTAATTCAGCATCCCTGCACTCAAATCAACTGAAGATGGAGCTGTGA 1116 0.4839 METAALGSSCPILHHDDSALESLQFGEGIQRLITAPSENMSSFTALLELPPTRAMELLHSQDSDGAANIASIPGNPIQHQINELKPYPFHNFTGNLTFPTNATLIERAAKYSVFAGGSSPMMEAASSVPSNSSETFDKVKNEPTETVSNPNLSQPLGCDPTVENKNQRPAKRKEREKKVRGTTKKNKSIALETSGDGEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAINPRIDFNLDSFLATDGPFLMDGNFTNMVPPAVQPDMSFSGTRQQCQPHWHFDPFHQTLWCKEEENRNFINPENSLLSYDSSANSASLHSNQLKMEL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01431 371 MobiDBLite consensus disorder prediction 123 161 - -
Pte18g01431 371 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 209 280 IPR036638 GO:0046983
Pte18g01431 371 SMART finulus 217 267 IPR011598 GO:0046983
Pte18g01431 371 MobiDBLite consensus disorder prediction 121 186 - -
Pte18g01431 371 Pfam Helix-loop-helix DNA-binding domain 215 262 IPR011598 GO:0046983
Pte18g01431 371 FunFam transcription factor bHLH48-like isoform X1 208 280 - -
Pte18g01431 371 Gene3D - 208 280 IPR036638 GO:0046983
Pte18g01431 371 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 112 355 IPR024097 GO:0006355
Pte18g01431 371 Coils Coil 251 271 - -
Pte18g01431 371 CDD bHLH_AtBPE_like 201 286 - -
Pte18g01431 371 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 211 261 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01431 Pte-Chr18 26042404 26046634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01431 19 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 53.543 9.38e-104 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte18g01431 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01431 - - qsa:O6P43_010177 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01431 18 26042404 26046634 Pte18g01431 18 26042404 26046634 RCT