Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01430 ATGGCTACTTCATGTACATTCTTATCTCTTCTTGCTTTATCATTCACACTTCTCTTCGTTCCTAGCTCACCTTCATCTGAGTCTCAAATCCTACTCACCTTCAAGGCTTCTATTCAAGACACACAGAACTTTCTCTCCAGCTGGTCTAATACCTCACTTACTAGGCACTGCAATTGGACTGGAATCGCGTGTTCACCTTCATTCTCTGTAACTTCTCTTAACCTTCAAAGCTTGAATCTTTCTGGTGATATCTCATCAACCATATGTGAACTTCCATCTCTGTCTCACCTCAATCTTGCTGATAATCTCTTCAACCAGCCTATCCCTCTTCATCTCTCTCAGTGCAGTTCTTTGCTGACTTTGAATCTAAGTAACAATCTCATATGGGGTACCATCCCTGACCAGATTTCTCAGTTTACTTCCTTGAGTGTTCTTGATTTGAGCAGAAACCATATTGAGGGAAAGATCCCAGAAAGCTTAGGCATCTTAAGGAACCTAACAGTTCTCAACTTGGGAAGCAACCTAATATCAGGTAGTGTACCTCCTTTCTTTAAGAATTTCACTGAGCTCATCGTTCTTGACTTGTCTCAAAACTCATACTTAGTGAGTGAGATTCCAAGTAGCATTGGACAACTAAAAAGTCTTGAGCATCTCGTGCTCCATAGCTCTGGTTTTCAAGGTAAAATTCCAGAGTCTTTTGTCGGGTTGCGCAGTTTGACTCATTTGGACCTTTCTCAGAACAATTTAACTGGTGGGATTCCTCAAACACTTCTATCTTCTCTACAGAATATTATTTCCTTTGATATTTCGCAGAACAAACTTTTGGGGCCATTACCAAACAGTGCTTGTAAAGGTAATGGCCTTGCAGATCTTAGTCTCCACACAAATTTCTTTACTGGTTCAATCTCCAACGCCATTAGTGAATGTAGAAATCTGGAGAGGTTTCAAGTTCAGAACAACGGATTTTCTGGAAAATTTCCTGATAAATTATGGTCACTGCCCAGAATCAAACTTATCAGAGCTGAAAACAACAAATTCTCAGGAGAAATACCAGAATCAGTTTCAGTAGCTACTCAACTGGAGCAAGTTCAAATCGATAATAATAGCTTCACCAGTAAAATTCCTCAGGGTCTTGGATTGTTGAAGACTTTGTACAGATTTTCTGCATCACTAAATAGATTCTATGGTGAACTACCTCCAAACTTTTGTGATTCCCCTGTTATGAGTATAATCAATCTCTCCAACAATTTACTTTCCGGTCAAATCCCTGAGCTGCAAAAATGTCGGAAACTAGTGTCCCTGTCTTTGGCAGATAACAATCTTACTGGAGAGATACCTCAGTCACTTGTTGACTTGCCTGTGTTGACTTACCTTGACCTTTCGGACAACAATCTCACAGGTTCCATTCCACAAGGCCTCCAGAACTTGAAGCTTGCTCTTTTGAATGTGTCCTTCAATAGACTATCTGGTAGAGTCCCTCACGCTTTAATCTCTGGTCTCCCTGCTTCATTTCTGGAAGGGAATCCGGAACTTTGTGGTCCTGGATTACCAAATGACTGCCACAATGACAATGCCCATTCTTCTTGGTCCTCAAGTTTGACATATGCTCTTATCTCAGTTGGCCTTGCTGTTGGGACCATTACTGTAGCTGGTTTGTTTATAATGTACCATCGGTCTTCCAACCAAAAGCAGGAGGGACTGTGGCGCTCGGTGTTTTTCTATCCTCTTCGAATCAATGAACAAGATCTTATATCGGCAATGGATGAGAAAAACTCAACTCTACATGGCGTTAGTACTTTTGGCAGAGTTTGCATTATGAGCTTACCTAGCGGTGAACAAGTTGCTGTCAAGAAACTTGTCAACTTTGGGAGTCAGTCCTCGAAAAGTTTGAAGGCTGAAGTCAAGACTCTGGCAAAGATTAGGCACAAGAATATTATAAAAATATTGGGGTTTTGTCATTCTGATGATTCGATTTTCCTTATCTACGAGCACATGCAAAATGGAAGCTTAGGTGATTTGCTGGCTCGTCAAAATTTTGAATTGCAATGGGGTGTTAGATTGAAGATAGCAATCGGTGTCGCACTAGGTGTAGCATATATTCACAGGGATTATGTTCCACATTTACTTCACAGGAATGTCAAGTCGAGGAATATTCTCTTAGACGCAGACTTTGAACCAAAGCTGACAGATTTTGCTCTCGATCGAATTCTTGGAGAAGCTGCGTTTAAGACAACCTTAGCTTCTGAGTCTGCTTCTTCATGTTACCATGCTCCAGAATATGGGTACAGTAAGAAACCAAGTGAACAATGTGACATCTATAGTTATGGTGTTGTGCTGCTGGAGCTAGTTACTGGCAGGCAAGCTGAGGAAGCAGAACCAAGTCAGTCTCTTGACATAGTGAAGTGGGTTAGAAGGAAAGTCAACATTAATAATGGAGCATTTCAAGTCCTTGATCCTAAGATATCACAAAGTTCAGCACAGCAAATGATAGGAGCTCTAGAAATTGCTCTGCTTTGCACTTCTGTGATTCAAGAGAAACGGCCCTCCATGATTGAAGTTGTAAGAGCTCTTCAGTCTCTTGAGTCAAAGGCCTAA 2595 0.4108 MATSCTFLSLLALSFTLLFVPSSPSSESQILLTFKASIQDTQNFLSSWSNTSLTRHCNWTGIACSPSFSVTSLNLQSLNLSGDISSTICELPSLSHLNLADNLFNQPIPLHLSQCSSLLTLNLSNNLIWGTIPDQISQFTSLSVLDLSRNHIEGKIPESLGILRNLTVLNLGSNLISGSVPPFFKNFTELIVLDLSQNSYLVSEIPSSIGQLKSLEHLVLHSSGFQGKIPESFVGLRSLTHLDLSQNNLTGGIPQTLLSSLQNIISFDISQNKLLGPLPNSACKGNGLADLSLHTNFFTGSISNAISECRNLERFQVQNNGFSGKFPDKLWSLPRIKLIRAENNKFSGEIPESVSVATQLEQVQIDNNSFTSKIPQGLGLLKTLYRFSASLNRFYGELPPNFCDSPVMSIINLSNNLLSGQIPELQKCRKLVSLSLADNNLTGEIPQSLVDLPVLTYLDLSDNNLTGSIPQGLQNLKLALLNVSFNRLSGRVPHALISGLPASFLEGNPELCGPGLPNDCHNDNAHSSWSSSLTYALISVGLAVGTITVAGLFIMYHRSSNQKQEGLWRSVFFYPLRINEQDLISAMDEKNSTLHGVSTFGRVCIMSLPSGEQVAVKKLVNFGSQSSKSLKAEVKTLAKIRHKNIIKILGFCHSDDSIFLIYEHMQNGSLGDLLARQNFELQWGVRLKIAIGVALGVAYIHRDYVPHLLHRNVKSRNILLDADFEPKLTDFALDRILGEAAFKTTLASESASSCYHAPEYGYSKKPSEQCDIYSYGVVLLELVTGRQAEEAEPSQSLDIVKWVRRKVNINNGAFQVLDPKISQSSAQQMIGALEIALLCTSVIQEKRPSMIEVVRALQSLESKA* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01430 864 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 665 864 - -
Pte18g01430 864 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 259 523 - -
Pte18g01430 864 Gene3D Transferase(Phosphotransferase) domain 1 666 864 - -
Pte18g01430 864 SUPERFAMILY L domain-like 25 283 - -
Pte18g01430 864 SUPERFAMILY L domain-like 201 512 - -
Pte18g01430 864 ProSiteProfiles Leucine-rich repeat profile. 454 477 IPR001611 GO:0005515
Pte18g01430 864 Gene3D Ribonuclease Inhibitor 287 520 IPR032675 -
Pte18g01430 864 Gene3D Ribonuclease Inhibitor 181 286 IPR032675 -
Pte18g01430 864 FunFam Leucine-rich repeat family protein 26 181 - -
Pte18g01430 864 ProSiteProfiles Protein kinase domain profile. 589 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01430 864 Gene3D Ribonuclease Inhibitor 24 180 IPR032675 -
Pte18g01430 864 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Pte18g01430 864 Gene3D Phosphorylase Kinase; domain 1 596 665 - -
Pte18g01430 864 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Pte18g01430 864 Pfam Leucine rich repeat 429 488 IPR001611 GO:0005515
Pte18g01430 864 Pfam Leucine rich repeat 193 249 IPR001611 GO:0005515
Pte18g01430 864 FunFam probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 578 664 - -
Pte18g01430 864 PRINTS Leucine-rich repeat signature 239 252 - -
Pte18g01430 864 PRINTS Leucine-rich repeat signature 452 465 - -
Pte18g01430 864 Pfam Protein tyrosine and serine/threonine kinase 598 804 IPR001245 GO:0004672|GO:0006468
Pte18g01430 864 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 12 859 - -
Pte18g01430 864 SUPERFAMILY Protein kinase-like (PK-like) 596 857 IPR011009 -
Pte18g01430 864 SMART LRR_typ_2 116 139 IPR003591 -
Pte18g01430 864 SMART LRR_typ_2 452 475 IPR003591 -
Pte18g01430 864 SMART LRR_typ_2 187 212 IPR003591 -
Pte18g01430 864 SMART LRR_typ_2 163 186 IPR003591 -
Pte18g01430 864 SMART LRR_typ_2 236 260 IPR003591 -
Pte18g01430 864 SMART LRR_typ_2 91 115 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01430 Pte-Chr18 26034212 26037164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01430 31 860 Receptor kinase-like Gene Family AT5G06940 61.859 0.0 1025
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte18g01430 PK_Tyr_Ser-Thr 3.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01430 - - qsa:O6P43_006549 1254.2