Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01426 ATGGAGAATGGCAGAAAATATACCCTGAAGCCATGGAAGAAAGGACCAGCTAGGGGTAAAGGTGGCCCTCAGAATGCTTCGTGTGAATACCGGGGTGTTAGGCAAAGAACCTGGGGAAAATGGGTTGCTGAAATAAGAGAGCCGAAGAAAAGAACCAGGCTCTGGCTTGGCTCTTTTGCCACAGCTGAAGAAGCTGCCATGGCTTATGATGAGGCTGCAAGAAGGCTCTATGGCCCAGATGCTTACCTCAATCTTCCTCACATACAACCCAACTCTAGTTCTCACTTGATCAAGTCTCAAAAGCTTAAATGGCTGCCATCTAAGAAGTTCATTTCCATGTTTCCATCGTGCAGATTGCTCAATATAAATGCTCAGCCTAGTGTCCATGTCATACATCAGAGGTTAGAACAACTTAAGCAAACTGGGGCTTTAAATCAAAACCCTTCCTTTATTTCATCTCGTTGTGATCCAAAGGCTCCAGTTCAAATCACTGGCAGCGAATCCCATGCAGAAAGTCCTCCAATCAAGCAAAAAGATGATGAAAAGGGATCAGAAAATATGCTCAGAGATGTTCAAGAGAAACCTCAGATTGATCTCAATGAGTTTCTTCAGCAGTTGGGAATCCTGAAAAATGAACAGCCAGAAGGGACTGACAGCTCTGGCAGTTTGATGACACCAGAAACTTCATCAAAGGACTACGCTGAGCTTGGCTCCTTTGCTGACCAAACAGTTAACTGGGATGCACTGATTGAGATGCATGCAAATGCAGATAATCAGGGATTAGGATTGGACCAGTATCAGATGTCCGACATGAGGGAGGAGCTCGCTTTTCCCACTTCAATTTGGAATTTCTAG 855 0.4468 MENGRKYTLKPWKKGPARGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRTRLWLGSFATAEEAAMAYDEAARRLYGPDAYLNLPHIQPNSSSHLIKSQKLKWLPSKKFISMFPSCRLLNINAQPSVHVIHQRLEQLKQTGALNQNPSFISSRCDPKAPVQITGSESHAESPPIKQKDDEKGSENMLRDVQEKPQIDLNEFLQQLGILKNEQPEGTDSSGSLMTPETSSKDYAELGSFADQTVNWDALIEMHANADNQGLGLDQYQMSDMREELAFPTSIWNF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01426 284 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Pte18g01426 284 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Pte18g01426 284 MobiDBLite consensus disorder prediction 146 187 - -
Pte18g01426 284 MobiDBLite consensus disorder prediction 172 187 - -
Pte18g01426 284 MobiDBLite consensus disorder prediction 1 27 - -
Pte18g01426 284 FunFam Ethylene-responsive transcription factor 2 28 87 - -
Pte18g01426 284 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Pte18g01426 284 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
Pte18g01426 284 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Pte18g01426 284 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 5 247 - -
Pte18g01426 284 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Pte18g01426 284 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Pte18g01426 284 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01426 Pte-Chr18 25989935 25990789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01426 8 284 AP2-EREBP Transcription Factor Family AT3G57600 52.688 4.62e-92 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte18g01426 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01426 - - qsu:112016049 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01426 18 25989935 25990789 Pte18g01426 18 25989935 25990789 RCT