Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01402 ATGGAGGGAGTTTGCATCAATGATAAAGGATTAACCTTGGAATGTGTAAGGAAGGCTAACCCACCACCATTTTTGTTGAAAACTTACATGCTGGTGGATGATCCAGCCACCGATGATATTATATCTTGGAACGCAGATGGGACTGCATTTGTGGTTTGGCAACCAGCAGAGTTTGCCCGTGATCTTCTCCCAACCCTATTTAAGCACAGCAATTTCTCCAGCTTTGTCCGCCAGCTAAATACATATGGATTTCGCAAAGTTGCAACAAACAGGTGGGAGTTCGGCAATGAGGTATTCAGGAGAGGTGAAAAGGGGCGTTTATGTGAGATCAGGAGAAGAAAAGCTTTGGCTAATAAGCAACAAGTTGCAGCAAACAATAACCAAGCCAATGCATCGGAATATGAAGAAGATGATCAAAGGTCATCGTCAACTTCATCATCTGCCGGTTATAGTGGTCTTATTGATGAGAACAAAAGACTGAAGAAAGAGAATGGGATGCTAAACTTAGAGCTCCATTGCATGAGAAAGAAATGGAAGGAGCTACTTAACCTGGCGGCCAAGCATTCTCATGCCGAGGAACATCAGAAAGGAGATGATAGACCAAAGCTCTTCGGGGTTAGACTGGAGGTTCATGGAGACAGAGACACGAAGAGAAAGCGTAATGAGATGAGTGAAAGCGCAAGCTTCCTACTATCTCAGCTATGCAAATGA 711 0.4388 MEGVCINDKGLTLECVRKANPPPFLLKTYMLVDDPATDDIISWNADGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATNRWEFGNEVFRRGEKGRLCEIRRRKALANKQQVAANNNQANASEYEEDDQRSSSTSSSAGYSGLIDENKRLKKENGMLNLELHCMRKKWKELLNLAAKHSHAEEHQKGDDRPKLFGVRLEVHGDRDTKRKRNEMSESASFLLSQLCK* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01402 236 ProSitePatterns HSF-type DNA-binding domain signature. 63 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte18g01402 236 SMART hsfneu3 20 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte18g01402 236 Pfam HSF-type DNA-binding 24 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte18g01402 236 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte18g01402 236 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte18g01402 236 PRINTS Heat shock factor (HSF) domain signature 24 47 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte18g01402 236 MobiDBLite consensus disorder prediction 118 151 - -
Pte18g01402 236 Gene3D - 16 115 IPR036388 -
Pte18g01402 236 SUPERFAMILY "Winged helix" DNA-binding domain 20 113 IPR036390 -
Pte18g01402 236 FunFam Heat stress transcription factor B-4 16 114 - -
Pte18g01402 236 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 181 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01402 Pte-Chr18 25820415 25822359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01402 21 209 HSF AT2G41690 52.657 2.51e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte18g01402 HSF_DNA-bind 6.8e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01402 K09419 - qsu:112013936 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01402 18 25820415 25822359 Pte18g01402 18 25820415 25822359 RCT