Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01399 ATGGAGGCCTCTACGATAACTGAGTTAGATGATTTCACTCTGGCTTCTAGGAAAGCTGAAAAAGCCGCTTGTCGAAGGTTTGAAGCTGCTGAGTGGCTTGAAAGGTTGGTGGGTCCGCTAGGAATATCCAGTCAGCCATCTGAGAAAGAGTTAGTTTATTGCTTGAGAAATGGTTTGTTTCTTTGCAAGGCTATCAACAAGATCCAACCAGGAGCTGTTGCAAAGGTCGTGGACAATCAACAGTTTTCACAGTCACTTGCCCGGGAATCTCAACCTTTACCTGCATACCAGTACTTTGAGAATGTCCGCAACTTTCTTGTTGCAGTGGAAGACTTGAAGCTCCCTGCTTTTGAAGCCTCTGATCTTGAGATGGATACACTGGACTTGTGCGCAGCAGCCAGGGTTGTGGATTGCATTTTAGCTCTCAAGTCATATCAAGAGTGGAAGTTGCTGGGTGCTGAAAGCGGGTTCAACAAATATGGAAAATCTCCTTTGGTTATGCAGTCTGCCTGCAGAATGCAGTCGAGATCAGATTCATGTCGGCAGTTAGATATGTCCTTGATGTGCGAAAAACAGGCTTCTCTTGAGGCTCCAAATGAGGAACGAGAAGCTGAAGTTGTGGAGTTGGTTGTCAAGCTTCTTGCTGAGTGTTTACTCGAGTCAAAAGAAAACTTTGACGGCAATCTTACTTCATTTTGTACACGACCCCAGTCATCTCCCATTTCACCGATGGTTCGTTGCCTTCCATTTTTCTGTAATGCATATCTTGATGTGGTTTATTTGCATCTTCTCGTGCAGTCCTGCGAAACTTGCAAAAGTACGGACAGCTGCAATTACCAGTATCGTTTTCAGTTGCTAGAAAAAGAAATTTCGGACCTCAAGTCCATGTTAGTAAGGACAAAAAAAGAGTTTGAACAGTTTCAGTCACTGATGCAGAAATATATGAAAGACCTAGAAGAATTGGTACAAGAGCTGGGTACTGCTGCTCTTGGATATCACAAGGTGGTTGAAGAGAATCGGAAGTTATACAACATGGTTCAAGATTTGAAAGGTAACATTCGTGTTTATTGTCGAATAAGGCCCTCTTTTAATCCTGCGTCAAATAACGTTATAAATTTCATCGGGGAGGATGGTTCTTTAGTCATCTCAATTCCATCAAAAGAACAAAAGGATGGAAGAAAAGTTTTCCATTTCAATCGAATTTTCGGCCCAAAAGCTACCCAAGACAATATTTTCAAGGACATTCAACCTTTAATCAGATCAGTGATGGATGGCTATAACGTGTGCATCTTAGCATACGGACAAACTGGATCAGGGAAAACTTATACCATGAGTGGTCCATCTAGTTCGTCTGCGAAGGAGCTTGGCATAAATTATCTAGCTCTGAATGATCTCTTTACTCTATCTGACAAGAGAAAAGATACCATAAGATATGAAGTACATGTTCAAATGGTCGAAATCTACAACGAACAAGTCAGAGACCTTCTGGCTGACGATTCATCTGTCTTCTTAACAAACAACAAATTAGAGATCCGGAGCTGTACAGAAAATGGCTTGAGTCTTCCAGACGCTACCATGCGACGGGTAAAATCTACCAACGATGTCCTGAACTTGATGAAGCTTGGAGAGTTCAACCGTGCTGTCTGCTTCACTGCTATGAATAACCAAAGCAGCCGTTCTCACAGCATCTTGACCATTCATGTTCAAGGCAAAGATACCACTGGAAGCAACATACACAGTCGCCTACATTTGGTAGACCTTGCGGGTAGTGAAAGAGTGGATAGATCAGAAGTCACGGGAGAGCGGCTTAAAGAGGCACAATATATCAATAAGTCGCTTTCTTGCTTGGGAGATGTGATTACAGCATTGGCTCAGAAGAATTCTCACATCCCCTACCGCAACAGCAAGCTTACTCTCCTGCTTCAGGATTCATTAGGGGGGCAAGCAAAAACATTGATGGTTGCTCATGTGAGCCCCGAGGAAGAGTCATTTGGTGAAACAATTAGTACTCTAAAGTTTGCGCAGAGGGTGTCGACTGTGGAACTTGGGGCTGCTCGTTTGAATCGAGAAAGCAACGAGGTTATGCAACTCAAAGCACAGGTTGAGAGCCTAAAGAGTGCTTTGGCAAAGAAGGAAGTTGTGTTATATGGAAACAAGGAACCAACAACTCTTACTGGGAAACTGAACGCAATGCCTGAGAAAACTCCACCTCGGTCCGGAAGACGACTGAGCATTGAGAACTGTAACTCTTTGAAGAACGACAGTGTGATGAATAATGAGGAGAAAAAGGGAGTGAAAACACCTACTGCCACAACTCGTTCCAGAAGATTAAGCTTAGAAGCACCTAAGGTTGCTACGAAGGATACTCTTCAGCCAAAAATAACGGATAGTATAAGCAGAATTCCCCAGATTGAGTCAGCAGTGAAACAGTCATACTTACGTGCACAAGATGCAGAATCTTTGTCAAAGCTGAATAGACAGTTACACAATAAAATGGCAATAGCTACACGAAGTCCCACAAGTGGTGTCTATCAGAAGAGAATAATCAAAACTGATAGTCGAACACAAATCCATACTCTCCAGCTGCCCCTGACGCCTGAAAAAGCATTGCCCGTCACAAAGGATTTCCAAACTGTTGAGGTCACTGCCACAAATGGGAAAAAGTCACAGATAAGAAGATCATTAAGGACAATCGGGAAAATGATCAATGGGTCTGAAAAGAGGAACCAGCAGAACGCAGTGCCAGTTTTGTCGCCAATTAGAGGTGTAAACCATGCCGCCAATGATGCCAAGTCTCCATTAACAGCCACTGCAAATTCACAGAGAAGACAGTCTCTCACTGGTATTCCACTGGACAAATCCCGCAGATCTTCTCTCGGAGGAAAAATGAATGACTGCAAGGAAAACGATGTCAAGACTCCAAGAACACCTCCCATGACCAAACGTTGGATGTAG 2955 0.4338 MEASTITELDDFTLASRKAEKAACRRFEAAEWLERLVGPLGISSQPSEKELVYCLRNGLFLCKAINKIQPGAVAKVVDNQQFSQSLARESQPLPAYQYFENVRNFLVAVEDLKLPAFEASDLEMDTLDLCAAARVVDCILALKSYQEWKLLGAESGFNKYGKSPLVMQSACRMQSRSDSCRQLDMSLMCEKQASLEAPNEEREAEVVELVVKLLAECLLESKENFDGNLTSFCTRPQSSPISPMVRCLPFFCNAYLDVVYLHLLVQSCETCKSTDSCNYQYRFQLLEKEISDLKSMLVRTKKEFEQFQSLMQKYMKDLEELVQELGTAALGYHKVVEENRKLYNMVQDLKGNIRVYCRIRPSFNPASNNVINFIGEDGSLVISIPSKEQKDGRKVFHFNRIFGPKATQDNIFKDIQPLIRSVMDGYNVCILAYGQTGSGKTYTMSGPSSSSAKELGINYLALNDLFTLSDKRKDTIRYEVHVQMVEIYNEQVRDLLADDSSVFLTNNKLEIRSCTENGLSLPDATMRRVKSTNDVLNLMKLGEFNRAVCFTAMNNQSSRSHSILTIHVQGKDTTGSNIHSRLHLVDLAGSERVDRSEVTGERLKEAQYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGQAKTLMVAHVSPEEESFGETISTLKFAQRVSTVELGAARLNRESNEVMQLKAQVESLKSALAKKEVVLYGNKEPTTLTGKLNAMPEKTPPRSGRRLSIENCNSLKNDSVMNNEEKKGVKTPTATTRSRRLSLEAPKVATKDTLQPKITDSISRIPQIESAVKQSYLRAQDAESLSKLNRQLHNKMAIATRSPTSGVYQKRIIKTDSRTQIHTLQLPLTPEKALPVTKDFQTVEVTATNGKKSQIRRSLRTIGKMINGSEKRNQQNAVPVLSPIRGVNHAANDAKSPLTATANSQRRQSLTGIPLDKSRRSSLGGKMNDCKENDVKTPRTPPMTKRWM* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01399 984 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 852 IPR027640 GO:0003777|GO:0007018
Pte18g01399 984 PRINTS Kinesin heavy chain signature 551 568 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g01399 984 PRINTS Kinesin heavy chain signature 630 651 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g01399 984 PRINTS Kinesin heavy chain signature 581 599 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g01399 984 PRINTS Kinesin heavy chain signature 425 446 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g01399 984 MobiDBLite consensus disorder prediction 725 744 - -
Pte18g01399 984 Pfam Kinesin motor domain 377 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g01399 984 FunFam Kinesin-like protein KIN-14L 11 174 - -
Pte18g01399 984 Coils Coil 687 714 - -
Pte18g01399 984 Gene3D - 8 167 IPR036872 -
Pte18g01399 984 Gene3D Kinesin motor domain 294 682 IPR036961 -
Pte18g01399 984 MobiDBLite consensus disorder prediction 933 952 - -
Pte18g01399 984 MobiDBLite consensus disorder prediction 933 984 - -
Pte18g01399 984 SMART ch_5 25 136 IPR001715 GO:0005515
Pte18g01399 984 SMART kinesin_4 350 688 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g01399 984 MobiDBLite consensus disorder prediction 958 975 - -
Pte18g01399 984 CDD CH_AtKIN14-like 25 144 - -
Pte18g01399 984 ProSiteProfiles Kinesin motor domain profile. 352 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte18g01399 984 ProSiteProfiles Calponin homology (CH) domain profile. 23 147 IPR001715 GO:0005515
Pte18g01399 984 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 294 682 - -
Pte18g01399 984 Pfam Calponin homology (CH) domain 24 145 IPR001715 GO:0005515
Pte18g01399 984 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 352 712 IPR027417 -
Pte18g01399 984 SUPERFAMILY Calponin-homology domain, CH-domain 22 154 IPR036872 -
Pte18g01399 984 Coils Coil 283 324 - -
Pte18g01399 984 ProSitePatterns Kinesin motor domain signature. 580 591 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01399 Pte-Chr18 25789757 25796026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01399 288 711 Calmodulin-binding Proteins AT5G65930 38.498 2.59e-72 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01399 K10406 - qsa:O6P43_010128 1120.15