Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01374 ATGGGCTTGGCGACAGAGTCACAGTTTCATGTCTTGGCTGTCGATGACAGCCTCATAGATAGGAAGGTTATCGAAAGGCTTCTCAGAACTTCATATCAAGTGACTACGGTTGATTCCGGTGATAAGGCTTTAGAGTTTCTGGGATTAAACGAAAATGATCAAAACGAACTCAATACACCTTCTGTTTCTCCAAATAGCCATCGGGAGGTGGAGGTTAATCTAATTATTTCAGACTACTGCATGCCTGGCATGACGGGTTACGATTTGCTCAAAAAAATTAAGGAGTCATCTTTTAGAAACATACCAGTTGTGATTATGTCATCTGAGAACGTGCAATCAAGGATTACAAGATGTTTGGAGGAAGGAGCTGAAGAATTTTTCTTGAAGCCAGTGAGAGTTTCCGATTTGCACAAGCTTAAAACTCATATGATGAAGACCAAGCTGCAAAATCAAAATCAAGAAATACAACAAAAGCATGGTGGATCAGAGATCACAAATTTCGTAATGCAGGAACACCAACTACATCTACCACAATTGGTGTCACAAGAACTGCAGCAGCAAGCATTGTCATCACAGGAAATGCAGCAGTTCTTAGCATCACAAGGACTACAACAGCATTATGCAGTATCACACAAACCGCAAGAACAGCAGCCATCAATGATGCAGGAACCACAAGAGCGACAATCACAACAGCCAGTGCTACAAGAACTGCAACAGCAACAATTGCAACAGTCATTGATGCAAGAACAACTGGATACTGAACAACAATTAGCGGTTCAAGGACAGCAGAAGCAATCAATATCTCAAACCAACAATAACAAGAGGAAGACCATGGAAGAAGGGATTTCACCAGATTGTGCAAGACCAAGATATGATGGAATTGCAACTACGGTTTGA 897 0.4136 MGLATESQFHVLAVDDSLIDRKVIERLLRTSYQVTTVDSGDKALEFLGLNENDQNELNTPSVSPNSHREVEVNLIISDYCMPGMTGYDLLKKIKESSFRNIPVVIMSSENVQSRITRCLEEGAEEFFLKPVRVSDLHKLKTHMMKTKLQNQNQEIQQKHGGSEITNFVMQEHQLHLPQLVSQELQQQALSSQEMQQFLASQGLQQHYAVSHKPQEQQPSMMQEPQERQSQQPVLQELQQQQLQQSLMQEQLDTEQQLAVQGQQKQSISQTNNNKRKTMEEGISPDCARPRYDGIATTV* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01374 298 ProSiteProfiles Response regulatory domain profile. 10 144 IPR001789 GO:0000160
Pte18g01374 298 MobiDBLite consensus disorder prediction 205 234 - -
Pte18g01374 298 CDD REC_typeA_ARR 11 139 - -
Pte18g01374 298 SUPERFAMILY CheY-like 8 159 IPR011006 -
Pte18g01374 298 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 247 IPR045279 GO:0009736
Pte18g01374 298 Gene3D - 10 281 - -
Pte18g01374 298 SMART REC_2 9 140 IPR001789 GO:0000160
Pte18g01374 298 MobiDBLite consensus disorder prediction 257 298 - -
Pte18g01374 298 MobiDBLite consensus disorder prediction 257 277 - -
Pte18g01374 298 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01374 Pte-Chr18 25569942 25571689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01374 1 299 Response Regulator Gene Family AT3G57040 49.007 7.78e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte18g01374 Response_reg 1.7e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01374 K14492 - qsa:O6P43_006390 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01374 18 25569942 25571689 Pte18g01374 18 25569942 25571689 RCT