Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01367 ATGGGTACTAGAACTGTCAATAACTTTAATGCAACTGACGATAACAGGGTTGTGAAAGGGATGCCGAGCTACGCTCCTCAAGTACCTGGGTCTAACACTAGTGCCATAGAAGGAAACACTCTTCATACTTCTAGGACCTCCGAATTTGGAACACTTGAGCAGTCTCTCGGATTCCTTGTAGATGATGCTGTTAATCTGGCTAGAAATCCCATTCTCAATCAAATAAAGTCAAATAGTCAAGGTCTTGGTAACAATATTCAATTCGGCGCTTTAAATAAGCCACAAGCAATTTCGGACATGAATTTCTCTGCTGCTATAGCGGGGTCTCAGACATTAGCTTTTCCTAGAGATTCTCAATCGAATTTTGCTTCTGGATCTGTTGGCCATCTTGAGAACTGGGGAGACTCTAACATGGCCGATGCCAGCCCCCGAACTGATACTTCAACAGATGATACGGACGATAAAGTTCAGAGGCCTGAAAGGGGTCATATAGGTGTTGCAGCCTCTGATTCTAGTGACAAATCGAAGGAAAGAAATTTAGATCAAAAGACACAACGCAGGTTAGCTCAAAATCGTGAAGCTGCCAGGAAAAGCCGGTTAAGGAAGAAAGCATATGTACAGCAGCTAGAGAGTAGCAGGTTGAAATTGACTCAGCTTGAGCAAGAGCTCCAGCGGGCTCGTCAGCAGGGTATCTTTATTTCAAGCTCAGGAGATCAATCCAATTCTAATAGTGGAAACGGTGCAATGGCATTTGATGTAGAATATGCGAGGTGGCTAGAGGAACAGAACAGACAAATTAATGAGCTTCGAGCTGCAGTCAATTCACATGCTGGGGACATTGAACTTCGCACAATTGTTGACAGTGTCATGGCACACTTTGAGGAAATTTTCAACCTTAAAGGCGTTGCTGCAAAGGCTGATGTTTTCCATATCTTATCAGGAATGTGGAAGACCCCAGCAGAACGATGTTTTATGTGGATTGGAGGCTTCCGCTCATCTGAGCTTCTCAAACTGTTGGTGACTCAGTTGGAACCTTTGACTGAACAGCAATTGATGGGGATCTACAACTTGCAGCAATCATCACAGCAGGCTGAGGATGCACTTTCTCAAGGAATGGAAGCATTACAGCAATCTTTGGCTGAGACTCTAGCCAGTGGGTCACCTGGTTCCTCTGCCCCAGCAGGAAATGTGGCAAATTATATGGGTCAAATGGCTATGGCCATGGGAAAGCTGGGAACCCTAGAGGGTTTTCTTCGTCAGGCTGACAATCTGCGGCAGCAGACTCTACAACAAATGCTGCGTATTTTGACAACCCGGCAATCTGCTCGAGCGCTTCTGGCAATAGGTGACTATTTCTCTCGGCTACGAGCCCTGAGTGCACTCTGGCTTGCCCGGCCCCGTGAGTGA 1407 0.4606 MGTRTVNNFNATDDNRVVKGMPSYAPQVPGSNTSAIEGNTLHTSRTSEFGTLEQSLGFLVDDAVNLARNPILNQIKSNSQGLGNNIQFGALNKPQAISDMNFSAAIAGSQTLAFPRDSQSNFASGSVGHLENWGDSNMADASPRTDTSTDDTDDKVQRPERGHIGVAASDSSDKSKERNLDQKTQRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQSNSNSGNGAMAFDVEYARWLEEQNRQINELRAAVNSHAGDIELRTIVDSVMAHFEEIFNLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVTQLEPLTEQQLMGIYNLQQSSQQAEDALSQGMEALQQSLAETLASGSPGSSAPAGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAIGDYFSRLRALSALWLARPRE* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01367 468 SUPERFAMILY Leucine zipper domain 183 226 IPR046347 GO:0003700|GO:0006355
Pte18g01367 468 CDD bZIP_HBP1b-like 183 235 - -
Pte18g01367 468 PANTHER TRANSCRIPTION FACTOR TGA9 124 468 - -
Pte18g01367 468 Gene3D - 182 234 - -
Pte18g01367 468 Coils Coil 259 279 - -
Pte18g01367 468 Coils Coil 202 229 - -
Pte18g01367 468 MobiDBLite consensus disorder prediction 123 202 - -
Pte18g01367 468 Pfam bZIP transcription factor 183 223 IPR004827 GO:0003700|GO:0006355
Pte18g01367 468 SMART brlzneu 179 242 IPR004827 GO:0003700|GO:0006355
Pte18g01367 468 Pfam Seed dormancy control 265 340 IPR025422 GO:0006351|GO:0043565
Pte18g01367 468 ProSiteProfiles DOG1 domain profile. 248 465 IPR025422 GO:0006351|GO:0043565
Pte18g01367 468 MobiDBLite consensus disorder prediction 170 195 - -
Pte18g01367 468 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Pte18g01367 468 FunFam BZIP family transcription factor 182 231 - -
Pte18g01367 468 MobiDBLite consensus disorder prediction 146 161 - -
Pte18g01367 468 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01367 Pte-Chr18 25509827 25514541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01367 138 469 bZIP Transcription Factor Family AT3G12250 77.177 0.0 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte18g01367 DOG1 6.9e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01367 K14431 - qsu:112036206 683.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01367 18 25509827 25514541 Pte18g01367 18 25509827 25514541 RCT