Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01359 ATGAGAGAGGAAGATTCTAATTGGTTCTCAAGATGGGAAGAACAACTCCCTTCCCCAGAGGAGCTTATGCCTCTCTCTCAATCTCTCATCACTCCCGATCTTGCTTTAGCTTTTGATATCAGAAACCCAAACCGCAATCATCACCTTCATAACAGTAACAACGATCTTAGTGCTATTAATAACACCCACCACCTCAAAAGGAACAGTACTAGCCCACAGCAGCAACCAACCCCACCTTCTGTTCCTACTGCTAATAGTCCTTTACCTTCACCCGGGAATCCCAACCAGCAGCAACACAATTCATCTGAATTTGCAGATTCCGCTGAGTTGGGTTCTGGTACAGCTGGTGATGAACCAGCTAGGACACTTAAAAGACCGAGGCTTGTCTGGACCCCACAACTTCACAAGAGGTTTGTCGACGCTGTGGCTCACTTGGGTATCAAAAATGCTGTGCCCAAGACTATAATGCAGCTCATGAGTGTGGATGGGTTGACTCGAGAGAACGTGGCTAGTCATTTGCAAAAATACAGACTTTATCTGAAACGCATGCAGGGATTGTCGGCTGGCAACGGGGGTGGTGCTTCTGGAGGAGGAGCTGCTGCCTTGGCTGCTTCGGCAGATCCTGCTACGGACCATTTGTTTGCGAGTTCGCCGGTGCCACCTCATTTCTTGCATCCGGGTCGGCCCAATTCTGATCATTTCATGCCGTTTGTGCCGGTTCCGGCTTTACAGCACCACCATCACCAGCAGCAGATAGCTGCAGCTGCAGCTGTGACAGGGCATCCACAATTGCAGCCACATTACCATAGGCAGATGGGGCATTTCGGGTCTCCTCCGAACGGGCACTTTGACCATCCTTTCCTAGCCAGGCAATCTCAGTCGTTTTATAGGATGGGTGCACCATTGCATAGCCAAGTACCTAATTATATAGAGGACATGGAGTCAGCTAATACAGCTGGAGGGCGAAAGGTTCTTACTTTGTTTCCAACTGGAGATGATTAA 1002 0.492 MREEDSNWFSRWEEQLPSPEELMPLSQSLITPDLALAFDIRNPNRNHHLHNSNNDLSAINNTHHLKRNSTSPQQQPTPPSVPTANSPLPSPGNPNQQQHNSSEFADSAELGSGTAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAGNGGGASGGGAAALAASADPATDHLFASSPVPPHFLHPGRPNSDHFMPFVPVPALQHHHHQQQIAAAAAVTGHPQLQPHYHRQMGHFGSPPNGHFDHPFLARQSQSFYRMGAPLHSQVPNYIEDMESANTAGGRKVLTLFPTGDD* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01359 333 MobiDBLite consensus disorder prediction 90 108 - -
Pte18g01359 333 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 307 IPR044841 GO:0003700|GO:0006355
Pte18g01359 333 MobiDBLite consensus disorder prediction 75 89 - -
Pte18g01359 333 MobiDBLite consensus disorder prediction 66 124 - -
Pte18g01359 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 126 178 IPR006447 GO:0003677
Pte18g01359 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 181 IPR017930 -
Pte18g01359 333 Pfam Myb-like DNA-binding domain 129 177 IPR001005 -
Pte18g01359 333 SUPERFAMILY Homeodomain-like 122 182 IPR009057 -
Pte18g01359 333 FunFam Two-component response regulator 121 184 - -
Pte18g01359 333 Gene3D - 122 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01359 Pte-Chr18 25441995 25445727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01359 1 334 G2-like Transcription Factor Family AT3G10760 57.143 1.12e-103 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte18g01359 Myb_DNA-binding 2.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01359 - - qsa:O6P43_006330 461.84