Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01345 ATGCCATACCTTGTTCGTGAGAATCTATTTATTGGTAACATAGGTGATGCGGCGGCGGTACTTGAAAATGGGAGTGATGAGATCAAACATATGCTGTCGGTTCTGAGCTCAACTTCCATTTCGTTCTTCTCACAATGGCGTGAAGGATTAACCATTCCCACCGAGGAAATCAACAAGGTCTATGCTGGTGGATCTGATGCTGCCACTGACAATTTGGTTGATGCTTCCAGGACTTCATTGTCGCCGGACAAGCTTCTCTACTCCTTGGAGTATGCCGGGAAGGATCTTAAACTGGTCAGGATGGCAGTGGCCATAAGGGATATGGAGACTGAGGATTTGTTGGATTACTTGGAGGTCTGCTTGGATTTTATTGACACCAGCAGAAAACAAGGCTCCGTTCTCGTCCACTGCTATGCTGGAGTATCAAGGAGCGCGGCAATCATTACAGCTTATTTGATGAGAACCGAAGGTCTATCTCAAGAAGATGCTATTGAGTCTTTAAAACAAAGCTGTGAATTTGTTTGCCCCAATGATGGTTTTCTTGAGCAGCTAACAATGTTTGAAAAGATGGGATTCAAGGTAGATCATTTCAGCCCAATATACAGGCGGTTTCGCTTAAAAAATCTGGGTGAAACATATAATAGAGGCGAGAAAATTGATGGTTCCAAGTTAGGGGCAGATCCTGGCAAGCCCAAAGAAGCTTCCACTGAATCAGAAGTGGCTCTTGGCACAGGAAATAAATGCACTACTGCATACCATTGCAAGAAGTGTCGAAGGGTTGTTGCACTGCAAGATCATGTTGTGGATCACTCTCCTGGTGAGGGTGAGAGTGCTTTTGATTTGCGCAAGTGGAGAAGTGGCTACCCTTTTAATAAGTCTGATGAATCTACATGTTCATCCATATTCACGGAACCTCTGAAGTGGATGATAGCAGTTGAGGAAGGCGCATTGGAGGGTAGGTTGTCCTGTGCCAACTGCGATTCGCGCTTGGGATACTTCAACTGGTCAGGTATTCAATGCAGTTGTGGAAGCTGGATTACCCCTGCGTTTCAGCTCCACGAAAGCCGAGTGGACAAGAGCACTATCTGA 1089 0.4564 MPYLVRENLFIGNIGDAAAVLENGSDEIKHMLSVLSSTSISFFSQWREGLTIPTEEINKVYAGGSDAATDNLVDASRTSLSPDKLLYSLEYAGKDLKLVRMAVAIRDMETEDLLDYLEVCLDFIDTSRKQGSVLVHCYAGVSRSAAIITAYLMRTEGLSQEDAIESLKQSCEFVCPNDGFLEQLTMFEKMGFKVDHFSPIYRRFRLKNLGETYNRGEKIDGSKLGADPGKPKEASTESEVALGTGNKCTTAYHCKKCRRVVALQDHVVDHSPGEGESAFDLRKWRSGYPFNKSDESTCSSIFTEPLKWMIAVEEGALEGRLSCANCDSRLGYFNWSGIQCSCGSWITPAFQLHESRVDKSTI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01345 362 PIRSF DUSP12 3 63 IPR016278 GO:0006470|GO:0008138
Pte18g01345 362 PIRSF DUSP12 86 362 IPR016278 GO:0006470|GO:0008138
Pte18g01345 362 MobiDBLite consensus disorder prediction 218 234 - -
Pte18g01345 362 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 114 169 IPR000387 GO:0016311|GO:0016791
Pte18g01345 362 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 360 - -
Pte18g01345 362 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 5 194 IPR029021 -
Pte18g01345 362 Gene3D Protein tyrosine phosphatase superfamily 4 211 IPR029021 -
Pte18g01345 362 ProSiteProfiles Dual specificity protein phosphatase domain profile. 52 193 IPR020422 GO:0006470|GO:0008138
Pte18g01345 362 Pfam Dual specificity phosphatase, catalytic domain 97 189 IPR000340 GO:0008138|GO:0016311
Pte18g01345 362 ProSitePatterns Tyrosine specific protein phosphatases active site. 135 145 IPR016130 GO:0016311|GO:0016791
Pte18g01345 362 MobiDBLite consensus disorder prediction 218 238 - -
Pte18g01345 362 SMART dsp_5 1 190 IPR020422 GO:0006470|GO:0008138
Pte18g01345 362 FunFam Dual specificity protein phosphatase 12-like 4 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01345 Pte-Chr18 25314940 25317691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01345 43 189 Protein tyrosine phosphatase (PTP) family AT3G06110 31.333 7.23e-16 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01345 K14819 - qsa:O6P43_010054 567.77