Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01343 ATGGTGGTTGAGGGCACAGCACCGTCCGTTTCATCATCTAGTATTAGTAGTGTGGAAGAGAGCGAATGCGATCATGAGGAATCAGGTTTTTCTGTCCTTATTGTGGATGATGATCATACCTGCCGCGCTCTCCACAAGACTACTGTCCGAAAGCAACTTGGCATCACCCCCATGGTCGCTAAGAATGGAAAAGAAGCAGTCAAACTCTTTCGCGCAGGCAATTTTTTCAATATCGTTTTCATGGACATGGAAATGCCAGTCATGAATGGACCTCAGGCAACGAAAGAGCTGCGTGAGATGGGAATTCAGAGCATGATAGTGGGATTGACATCATCTGATGATGATGAAGATAAAGCTAGGAAAGAGTTTTTGGCTGCTGGACTGGACAAATGCTTGAAGAAGCCTCTGACTCCAGCTATGGTGGAAGCTATCGAGAAGGAGTACGATAACAAGTACGATGACACCTGCATGAACTGTGGTGCTCCACATCATTTGTAA 498 0.4578 MVVEGTAPSVSSSSISSVEESECDHEESGFSVLIVDDDHTCRALHKTTVRKQLGITPMVAKNGKEAVKLFRAGNFFNIVFMDMEMPVMNGPQATKELREMGIQSMIVGLTSSDDDEDKARKEFLAAGLDKCLKKPLTPAMVEAIEKEYDNKYDDTCMNCGAPHHL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01343 165 CDD REC_hyHK_CKI1_RcsC-like 32 144 - -
Pte18g01343 165 SUPERFAMILY CheY-like 29 143 IPR011006 -
Pte18g01343 165 Pfam Response regulator receiver domain 32 139 IPR001789 GO:0000160
Pte18g01343 165 SMART REC_2 30 144 IPR001789 GO:0000160
Pte18g01343 165 MobiDBLite consensus disorder prediction 1 22 - -
Pte18g01343 165 PANTHER TWO-COMPONENT RESPONSE REGULATOR 28 155 - -
Pte18g01343 165 Gene3D - 11 155 - -
Pte18g01343 165 ProSiteProfiles Response regulatory domain profile. 31 149 IPR001789 GO:0000160
Pte18g01343 165 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01343 Pte-Chr18 25307796 25308419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01343 30 141 Response Regulator Gene Family AT3G04280 50.442 5.06e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte18g01343 Response_reg 1.1e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01343 - - pvy:116141215 121.324