Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01341 ATGGGCGTAGAGATTTTGGAGCCAAACTCATGTATCAGAGGCTGCTGCACCAGCAACTCCGTTCCTCTTCATCTTCCACCTTCCTCTTACACTCTTGTCTCACAACTAGCTCGAGGAGCGGAGAGTGTTGTTTATCAAGGGATTTTCGACGGTAAGAAGGTTGCTGTGAAGAAACCTATTCTTTCTACTGCACAAGATCTTGATAGGTTCCACAAGGAGCTGCAATTGTTATGCAAATTAGATCATCCGGGAATAGCAAAAATGATTGCAGCACATGCAAAGCCGCCAAACTACATGTTTTTCTTTGACTACTACGAATCCAATCTAGCTGACAAGCTACATGTAGAAGAATGGAATCCAAGTACCGAAATAGCGCTTTGCATATCGATTCAGTTAGCAAAGGGCTTGCAATATCTGCATAAACTCGGGATTGTACATAGGGATGTGAAACCTGCAAATGTTCTTCTTGATGAAAAACTTTCCCCACACCTAGCTGATTTTGGTTTGGCAGAATACAAGATTGATCTTAAGAAAGTTTCCTCTGAGAATTGGAAGTCGTATGGAAAGCCTACTGGTGGTTTTCACAAAAAGAATATGGCTGGGACACTCATTTATATGGCTCCTGAAATATTAAACAAAGGGATACCTACAGAAAAATCAGATGTCTATAGCTTTGGCGTATTAATCAATGAACTCCTAACAGGTGTTGTCCCCTATACTGATCTTCGTGCAGAAGCACAGGCACACACTGTGTTGGAGATGAACTACACTGAGCAGCAACTCACAGCAGCTATTGTCTCTGAAGGATTGAGACCGGCTCTTGCTGGAACAGAGTTAGATTTGCCATCAAGTTTTTTGTCTATGATACAGAAGTGTTGGGATGCAAATCCAGAAGTCAGACCCTCTTTCAGCAACATCGTGATGGAACTTGATTTGATGATGAAACCTAGAGTGGCTGAAATTAAAGATAATACCACCGGACATCCTAATTCACAGGTTGATGAGCACATGGATAAAGATAGAGCTCTTTGGACTTGCCAAAAAAATATTGACTGGTCTGCTAAGGGAGAATTACTTTCTGGGAATGTTTGTGAAGTAAATTCTAGTATGAGAAATTGGCATAGGCATTATCCAGAGCCTTTAGCTTACCAGCCAATACTTTGTTGGGGTTCCTTTTCCACTTGTGGAAGAAGGGAAACAATGGAAGACACTCACTTCATTCTTCCTCATATCTGCAATGAACGTGACATTCATTTATTCGGCATCTTTGATGGTCATAGAGGTGCCGAAGCAGCTGAATTTTCTTCTCGAGCTTTCCCAGGATTCTTGCAAAATTTTAGTACAGTGAACAGTCCTGCAAGTGCACTGGAGGAAGCGTTTCTAATGACAGATGTTGCCTTCCGAAAAGAAATAGATACTATTAGAAAATCCAAGGGAAGAAGCAAGAAGAACTGGCATCCTGGTTGCACTGCTATTGCTTCGCTTATAGTTGGAAACAAGCTTTTGGTTGCTAATGCTGGTGATTGTAGGGCAATTCTTTGCCGAGGTGGGCATTCCTTTGTTCTAAGTAAGGATCATGTAGCAAGCTGTCCAACCGAAAGAGAGCGTGTCATACGTGCTGGAGTTAAAGTTCAATGGCAAGTTGATACATGGAGAGTTGGTGGAGCTGCTCTTCAGGTAACTAGGTCTATTGGTGATGATGACCTGAAGCCTGCTGTAACGGCAGAACCTGAAGTAATGGAAACTCTTATATCTGCTGAGGATGAATTTCTGGTAATGGCTAGTGATGGTCTCTGGGATGTGTTGAGTGATTTTGAAGTCATAAACATAGTAAAAGACACTGTCAAGGAGCCAGGGATGTGCTCCAAGAGATTGGCAACTGAAGCAGTGCAGCGTGGAAGCCATGATAATATTACAGTTATCATTGTTTTCTTACGTCCTGTATCTACAGCAGAAAGAATTTATTAA 1968 0.4192 MGVEILEPNSCIRGCCTSNSVPLHLPPSSYTLVSQLARGAESVVYQGIFDGKKVAVKKPILSTAQDLDRFHKELQLLCKLDHPGIAKMIAAHAKPPNYMFFFDYYESNLADKLHVEEWNPSTEIALCISIQLAKGLQYLHKLGIVHRDVKPANVLLDEKLSPHLADFGLAEYKIDLKKVSSENWKSYGKPTGGFHKKNMAGTLIYMAPEILNKGIPTEKSDVYSFGVLINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAIVSEGLRPALAGTELDLPSSFLSMIQKCWDANPEVRPSFSNIVMELDLMMKPRVAEIKDNTTGHPNSQVDEHMDKDRALWTCQKNIDWSAKGELLSGNVCEVNSSMRNWHRHYPEPLAYQPILCWGSFSTCGRRETMEDTHFILPHICNERDIHLFGIFDGHRGAEAAEFSSRAFPGFLQNFSTVNSPASALEEAFLMTDVAFRKEIDTIRKSKGRSKKNWHPGCTAIASLIVGNKLLVANAGDCRAILCRGGHSFVLSKDHVASCPTERERVIRAGVKVQWQVDTWRVGGAALQVTRSIGDDDLKPAVTAEPEVMETLISAEDEFLVMASDGLWDVLSDFEVINIVKDTVKEPGMCSKRLATEAVQRGSHDNITVIIVFLRPVSTAERIY* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01341 655 Pfam Protein phosphatase 2C 392 638 IPR001932 -
Pte18g01341 655 Pfam Protein kinase domain 30 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01341 655 SMART serkin_6 30 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01341 655 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 310 - -
Pte18g01341 655 SMART PP2C_4 378 643 IPR001932 -
Pte18g01341 655 SUPERFAMILY PP2C-like 374 647 IPR036457 -
Pte18g01341 655 Gene3D - 381 650 IPR036457 -
Pte18g01341 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Pte18g01341 655 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 379 649 - -
Pte18g01341 655 SUPERFAMILY Protein kinase-like (PK-like) 23 323 IPR011009 -
Pte18g01341 655 ProSiteProfiles PPM-type phosphatase domain profile. 388 645 IPR001932 -
Pte18g01341 655 CDD PP2Cc 390 645 IPR001932 -
Pte18g01341 655 SMART PP2C_SIG_2 403 645 IPR001932 -
Pte18g01341 655 Gene3D Transferase(Phosphotransferase) domain 1 19 346 - -
Pte18g01341 655 ProSiteProfiles Protein kinase domain profile. 30 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01341 Pte-Chr18 25276260 25282435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01341 99 656 PP2C-type Phosphatase Gene Family AT2G40860 64.550 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Pte18g01341 Pkinase 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01341 - - minc:123198059 962.6