Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01334 ATGAGTTCGAACTTCCCTTCACGTCTTGCTCAATGTACAACCCGTCTAATCAACTCTTGCTCTGACCCCCACCAAACTCTTATTGGAGACTATCCCCAACTTCTTTGGGATGGAAATGTTGACGGGGCTAATGTTTCCAGTGTTTATGTAAAACCCTTCTTGGTTTTGGACCTTATGTGGAACATGGCTTTCGTTTTGGTCGCCGCTAGTGTGCTTTTGTCGACTTCTGGTGAACACCCATCGACCCCTTTGAGGGTTTGGCTTTGCGGCTATGCGTTTCAGTGTATTTTTCAAATGGGTTTTACGTATTTCGAGTATAGGGAAAGTGGTTTCGATTCTCAGCCTGTGCAAATTAGGCATCCATCTTCTCAGAATTTGAGCAGGATTGTAAAAAGGTTAGAATCTGTGAACACTGTGATTTCATCAATCTGGTGGGTCATTGGATTTTATTGGATTATTATGGGTGGCCAAGCATTTCTGCAAGATTCCCCTCGCCTTTATTGGTCAACGGTGGTATTTCTAGCATTGGATGTGTTCTTTATCATCTTTTGTGTCGTAGTCGCATGTATAGCTCTTTTCTGCATTGCCCCTGTTTTGCTATTTGCTTCTGCTTTGAGCGTTGGCGAAGGCGCATCGGAGGAGGAAATCAGTTCTCTTCCAAAATACGCATTTCGTCATTCAAATCCACTGTTTGTATCCGACGATAATAAGAAGCATATTTACACTGTTGGAATGGGATCCAACAATATCGTCAAGGAACTTCCACTTCAGCCAGAGGATTCTGATTGTTGTATCTGCCTTTCTCGGTATGTTGATGGAGCACAACTGTATCGTCTTCCATGCAACCATCTCTTTCATTGTGGATGCATCAGCAGGTGGCTACGGATAAATGCAACGTGTCCCCTCTGTAAAGCTAACATTCTTAGAGGCGACACATTAGTGTGA 945 0.4349 MSSNFPSRLAQCTTRLINSCSDPHQTLIGDYPQLLWDGNVDGANVSSVYVKPFLVLDLMWNMAFVLVAASVLLSTSGEHPSTPLRVWLCGYAFQCIFQMGFTYFEYRESGFDSQPVQIRHPSSQNLSRIVKRLESVNTVISSIWWVIGFYWIIMGGQAFLQDSPRLYWSTVVFLALDVFFIIFCVVVACIALFCIAPVLLFASALSVGEGASEEEISSLPKYAFRHSNPLFVSDDNKKHIYTVGMGSNNIVKELPLQPEDSDCCICLSRYVDGAQLYRLPCNHLFHCGCISRWLRINATCPLCKANILRGDTLV* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01334 314 SMART ring_2 263 303 IPR001841 -
Pte18g01334 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 242 311 IPR013083 -
Pte18g01334 314 SUPERFAMILY RING/U-box 256 308 - -
Pte18g01334 314 PANTHER TARGET OF ERK KINASE MPK-1 50 308 - -
Pte18g01334 314 ProSiteProfiles Zinc finger RING-type profile. 263 304 IPR001841 -
Pte18g01334 314 Pfam Ring finger domain 262 304 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01334 Pte-Chr18 25240051 25242846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01334 49 311 C3H Transcription Factor Family AT1G68070 46.570 2.30e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01334 - - qsa:O6P43_034439 363.614