Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01331 ATGGAGCAAGGTTACAGTCAGGAACCTACTACACCTGGTGCTGTTGATAAGTCTAGGGTTTTGAATGTTAAGCCATTGCGATCCCTTCATCCTCTCTTTCCATCAACACCTCCTAATTTCTCATCAACGTCCCAAGGTGGATCTCCCTTTGTCTGTGCTGGTCCAAATGGTCCTTTCCCACCTGGAACTGCTCCTTTTTATCCATTCTTTGCTTCACCTAATTCTCAACGGGATGGACAGACTTCAGGTGGTGCATCCCTTGGTTTCAACACTCCAATATCTAATGCTGTTCCTATCAATTCTTTTAGGACATCAGCACGATCAGCAACTAGAACAGGAGCCAATCCATCTGAAAATGGAGGTGCAAGCTCCTCAAGGAGAACAGTGAGAAGTCGAGGGCTAGCATCTACCTATGAAGATGGATATGGTAATGGAATGCAGGATACAGAAGACACGCCTGGGTCTGAGAGGCTAAGAAGTAGGAGTCAGAAGAGGATGAGGAGTGGGCAAGACCCTGGCTTGGCCTCACCTGAATATGATGCAGATGCAGTGGTTAATGATGCACTTGCATTAGTGAATCCTGCTGTTTTAGACTTGTTGAGACAAGATCAAGGTGGAAGGGAGGCAGTTGGGTGTACACTTATGATATATGAATTTCTAAGGAAGAGGATCTCGCAAATTGAAGAGGCAAAGGAAGGAATTCCTGGACTTGGACTGATAAAGCGTCCTGATCTGAAAGCAGGTGCATCTATGATGGCCAGTGGGATCCGTGCAAATTCAAAGAAGCGAATTGGAACTGTGCCTGGTGTTGAGATCGGGGACATCTTCTTTTTGAGGTTTGAATTATGTTTGGTGGGATTGCATGCTCCATCTATGGCTGGAATTGACTACCTGAGTGTCAAAATCAATGTGGAGGATGAGCCTTTGGCAGTCAGCATTGTCTCCTCTGGTGGATATGATGACAGTGTGGAGGATCCAGACATATTGATTTATAGTGGCCAAGGTGGTGTTAACCGCAAAGATAAAGAAGGGAAGGATCAGAAACTTGAAAGAGGGAATCTAGCTTTGGAGAAAAGCCTGCATCGGGGAAATGATGTAAGAGTGATTCGGGGTGTAAAGGATATAGTAAATCAAACGTCAAAGATTTATATGTATGATGGTATTTATAAAATCCAGGATTCGTGGGTGGAAAAAGCCAAGTCCGGTCACAATGTATTTAAATATAAGCTGGTCAGGTTACCTGGTCAGCCTGAAGCATTTATGACTTGGAAATCAATTCAGCAATGGAGTGAGACGCCTTCTTCAAGGACGGGAGTTATTTTGCCCGATCTTACTTCAGGGGCAGAAATTTTGCCTGTTTGTCTTGTGAATGACATTGATAATGAGAAGGGACCTGAATATTTTACTTACATTCCTGGTCTTAAGTATTCAAAGACTGAGAATCCTGGTGAATCTTCTAGTGGATGTACTTGCCTACGTGGCTGTCAGCCTAGTCGTTTCAATTGTGATTGCATCCAGAAAAATGGAGGTTATCTACCATATGCTGCCAATGGGGGTCTTGTGAACCTAAAATCCTTGATATATGAGTGTGGTCCTTCCTGTCAATGCCCACCTAATTGCCGGAACCGTGTTTCTCAAGGTGGCCTCAAAATTCGTCTTGAGGTGTTCAGAACTAAGGATAAAGGCTGGGGTCTCAGGTCATGGGATCCCATTCGCGCTGGGACTTTCATAAGTGAATATGCAGGGGAAGTAATTGATAGTGCTAAGGTAGAGGAGCTTGGAAGTAAAAATGAGGATGATTATGTTTTTAATTCTACCCGTACTTATCCACAGCTGGAAATTTTTCCTGATGATTCTGAGCCAGTGAAAACCCCCTTTCCCCTGCTTATTAATGCAAAAGATGTAGGCAATGTGACTCGCTTTATGAACCATAGCTGTTCCCCTAATGTATTTTGGCGGCCACTCCAACGTGCAAATAAAAGCGAACCTGATCTTCATGTTGCATTTTATGCACTCCGACATATTCCTCCGATGGTGGAGTTGACATATGATTATGGAATTGTAACACCTCTTGAAGCAAGCCTGAAGAAGAAGAAATGCTTGTGTGGTTCACTCAAATGCAAGGGTTTCTTTTATTAA 2139 0.4362 MEQGYSQEPTTPGAVDKSRVLNVKPLRSLHPLFPSTPPNFSSTSQGGSPFVCAGPNGPFPPGTAPFYPFFASPNSQRDGQTSGGASLGFNTPISNAVPINSFRTSARSATRTGANPSENGGASSSRRTVRSRGLASTYEDGYGNGMQDTEDTPGSERLRSRSQKRMRSGQDPGLASPEYDADAVVNDALALVNPAVLDLLRQDQGGREAVGCTLMIYEFLRKRISQIEEAKEGIPGLGLIKRPDLKAGASMMASGIRANSKKRIGTVPGVEIGDIFFLRFELCLVGLHAPSMAGIDYLSVKINVEDEPLAVSIVSSGGYDDSVEDPDILIYSGQGGVNRKDKEGKDQKLERGNLALEKSLHRGNDVRVIRGVKDIVNQTSKIYMYDGIYKIQDSWVEKAKSGHNVFKYKLVRLPGQPEAFMTWKSIQQWSETPSSRTGVILPDLTSGAEILPVCLVNDIDNEKGPEYFTYIPGLKYSKTENPGESSSGCTCLRGCQPSRFNCDCIQKNGGYLPYAANGGLVNLKSLIYECGPSCQCPPNCRNRVSQGGLKIRLEVFRTKDKGWGLRSWDPIRAGTFISEYAGEVIDSAKVEELGSKNEDDYVFNSTRTYPQLEIFPDDSEPVKTPFPLLINAKDVGNVTRFMNHSCSPNVFWRPLQRANKSEPDLHVAFYALRHIPPMVELTYDYGIVTPLEASLKKKKCLCGSLKCKGFFY* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01331 712 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 117 704 - -
Pte18g01331 712 MobiDBLite consensus disorder prediction 69 132 - -
Pte18g01331 712 SMART G9a_1 260 416 IPR003105 -
Pte18g01331 712 SMART set_7 551 692 IPR001214 GO:0005515
Pte18g01331 712 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 94 712 IPR025794 GO:0016571
Pte18g01331 712 ProSiteProfiles YDG domain profile. 265 412 IPR003105 -
Pte18g01331 712 SUPERFAMILY PUA domain-like 249 432 IPR015947 -
Pte18g01331 712 SUPERFAMILY SET domain 427 687 IPR046341 -
Pte18g01331 712 Gene3D SET domain 433 712 IPR046341 -
Pte18g01331 712 MobiDBLite consensus disorder prediction 152 166 - -
Pte18g01331 712 Pfam Pre-SET motif 445 543 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte18g01331 712 ProSiteProfiles Post-SET domain profile. 696 712 IPR003616 -
Pte18g01331 712 Pfam SET domain 562 686 IPR001214 GO:0005515
Pte18g01331 712 ProSiteProfiles SET domain profile. 551 686 IPR001214 GO:0005515
Pte18g01331 712 Pfam SAD/SRA domain 264 416 IPR003105 -
Pte18g01331 712 Gene3D - 248 431 IPR036987 -
Pte18g01331 712 ProSiteProfiles Pre-SET domain profile. 487 548 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte18g01331 712 SMART preset_2 441 535 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pte18g01331 712 MobiDBLite consensus disorder prediction 68 178 - -
Pte18g01331 712 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 248 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01331 Pte-Chr18 25206566 25209445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01331 197 711 Su(var)3-9 homologs AT5G04940 54.991 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pte18g01331 SAD_SRA 2.8e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01331 K24405 - gmx:100805932 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01331 18 25206566 25209445 Pte18g01331 18 25206566 25209445 RCT