Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01299 ATGGAGCTCCATATTTGGCTAGCTTGCATTGCCTTCTTCATCCTCATCATCCGACCTCTGCTTAATCATACTCGAGTCAAAAACCGGCCACCTGGTCCAACCGGCGTCCCGATCTTCGGTAACCTTCTCCAACTTGGTCCAAATCTTCATGAGACCCTCTCTACCTTTGCAAAAATCTATGGCCCTATTTTGTCCCTTCGCCTTGGTTCTGTCAACTTCGTCGTTGTGTCCTCCCCGTCCGTAGCCCAAGAGATCCTCCAAAAAAACGATGAAAGCTTCGCCAACCATCCTGTTCCTGAAGTGATCGCTTCTCAGCCAAATGTGGAGAATACTATTGCTTGGGCTACCAGCGACCGCCGCTGGCGCATCCGTAGACGTATCTTCAGCACTCAAATGTTTTCAACCCAACGCCTTGACTCACTTCAACATGCTCGACTCCGTAAAGTCCATCAGCTCATAGAGCACCTCAGAAAACATTGTGTGTCTGGTACACCAGTGGAGATTGGAAAGCTTGCTTTCGCTACTTCTTTGAACTTCGTGTCAACCACAGTCTTCTCCGTTGATGTCGTTGACCCGAATTTCGAGTCAGCTGGAGAGTTCAATGATCTTATATGGAAGATCATGGAGTCTGGAGGAAAGCCCAACTTCTCAGATTATTTTCCAGTGTTGAAGAGATTTGATTTGCAAGGACTGAAAAGGCGTGCAAGGGTTTCTTATTTGAGATTGCATCAGATATTTGATGAAATCATCAGCAAGCGTTTGAGTACCAGAGCAACTTCCATGGAAAGACACGGTGATTTCCTGGATGTGATGCTTGATCATTGTGAAGATGAAAACTCAGGTTTCACCGTTGAAACCATCAAACCCATATTCACGGATTTATTTGTTGCGGGTGGTGACACAACTGGGATAACGATAGAGTGGGCTATGGCAGAAGTTCTTAGAAACCCTGAGATATTGCAAAATGCACGAAAGGAAGTGTTGGGAGTGATTGGCGCTAACGGAGAAGTTAAAGAAGGAGACATCGAAAGACTGCCATACATAAGTGCTATTGTGAAAGAGAGTCTTCGTCTTCATCCACCTGCACCCCTTCTACTGCCTTACATTGCCTCAAATGATGTAGTGATTGCTGGATTCAATATTCAAAAAGGAGATCACGTAATCATAAACGCATGGTCTATCGCAAGAGATCCTAACTACTGGGACGAACCATTGTCGTTTAAACCTGAGAGATTTTTGGGATCTGATGTCGACTACAAAGGCAAGCATTTTGAGTTCATACCGTTCGGAGCAGGCAAAAGGTTTTGCATAGGTATGCCACTGGCTAATCGAATGGCTTACTTGATTCTTGCGGCTATGTTACACTCATTCGACTGGAAACTACCTGAGGGTACAACTCATACTGACATGGACATGAGAGAACAGTTTGGAATCACATTGAAGATGGCAGTGCCACTTCGTGCTATTCCAGTTGCATGA 1479 0.4523 MELHIWLACIAFFILIIRPLLNHTRVKNRPPGPTGVPIFGNLLQLGPNLHETLSTFAKIYGPILSLRLGSVNFVVVSSPSVAQEILQKNDESFANHPVPEVIASQPNVENTIAWATSDRRWRIRRRIFSTQMFSTQRLDSLQHARLRKVHQLIEHLRKHCVSGTPVEIGKLAFATSLNFVSTTVFSVDVVDPNFESAGEFNDLIWKIMESGGKPNFSDYFPVLKRFDLQGLKRRARVSYLRLHQIFDEIISKRLSTRATSMERHGDFLDVMLDHCEDENSGFTVETIKPIFTDLFVAGGDTTGITIEWAMAEVLRNPEILQNARKEVLGVIGANGEVKEGDIERLPYISAIVKESLRLHPPAPLLLPYIASNDVVIAGFNIQKGDHVIINAWSIARDPNYWDEPLSFKPERFLGSDVDYKGKHFEFIPFGAGKRFCIGMPLANRMAYLILAAMLHSFDWKLPEGTTHTDMDMREQFGITLKMAVPLRAIPVA* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01299 492 CDD CYP76-like 57 490 - -
Pte18g01299 492 FunFam Cytochrome P450 76C4 21 489 - -
Pte18g01299 492 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 Pfam Cytochrome P450 30 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Pte18g01299 492 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 5 491 - -
Pte18g01299 492 SUPERFAMILY Cytochrome P450 25 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 Gene3D Cytochrome P450 20 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01299 492 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01299 Pte-Chr18 24987829 24990566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01299 25 491 Cytochrome P450 AT2G45550 40.254 2.09e-131 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01299 - - qsa:O6P43_006332 662.914