Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01298 ATGGCAGAGTGTCAAGGAGATGATACTTCAGGTACTAGACGCAAAGGCACTGCTGGAAAGCGTGCTGTGCCAGTGCCACCAGCACAGGGGGGCTATGTGCCTCTAGGAACATCAACTAAAACAACCCCATGTGGGGCTTGCAAGTTCTTGAGAAGGAAGTGCATTACTGGTTGCATATTTGCACCCTACTTTGGTCCGGACCAAGGTGCTGCTAGATTTGCAGCAGTGCACAGGATATTTGGTGCTAGTAATGTGTCCAAGCTCTTGTTGCATATCCCGGTAAACCGACGTCATGATGCAGTGGTTACTATATCTTATGAAGCTCAAGCAAGGCTCTCAGATCCCGTTTACGGCTGTGTCTTCACCATACTCGATTTGCAGCAACAGGCCTCTGGTTGCGCAGACGACGACGTGGGTCTGGCTAAGAGTCCTCCTCTCACCGAAACAGTTGCTGCTGGGATAGTAAAAGGACTTGTAGTTGCAACAATTGACTGTAATTTGCCTTGTGTAATTTGCTATGGACTGCATACTGTCTGA 537 0.4879 MAECQGDDTSGTRRKGTAGKRAVPVPPAQGGYVPLGTSTKTTPCGACKFLRRKCITGCIFAPYFGPDQGAARFAAVHRIFGASNVSKLLLHIPVNRRHDAVVTISYEAQARLSDPVYGCVFTILDLQQQASGCADDDVGLAKSPPLTETVAAGIVKGLVVATIDCNLPCVICYGLHTV* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01298 178 MobiDBLite consensus disorder prediction 1 34 - -
Pte18g01298 178 PANTHER LOB DOMAIN CONTAINING PROTEIN 40 130 - -
Pte18g01298 178 ProSiteProfiles LOB domain profile. 42 144 IPR004883 -
Pte18g01298 178 Pfam Lateral organ boundaries (LOB) domain 43 132 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01298 Pte-Chr18 24979527 24981654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01298 1 129 AS2 family AT3G03760 69.343 4.41e-60 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte18g01298 LOB 2.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01298 - - jre:109020316 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01298 18 24979527 24981654 Pte18g01298 18 24979527 24981654 RCT