Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01297 ATGTCTATGAGCAATGGACTTCAGTGCTGGTTGCTTCTGGTTTTGGTTACTGTTATACAGTGCACCAATCGTTCAGAGCAATTACAGTCCTCCCAGGTTGAGATCCTTCTAAAAATTAAGGGACTGTTAAACTACCCATCCATTTTAAGCAGCTGGCATAACAAGACAGATTTCTGCAACATCGACCCAAGTTCATCTTTCACCGTTGTATGCTATGAAGACGCAATAACCCAGCTTCATATAATAGGTGAAAGTGCAGCAGCCCCCATACAACCTAAGAACTTTTCCATGGATTCCTTTGTTACAACACTGGTTAAGCTTTCAAATTTGAAGGTCTTAAGACTGGTCTCTCTTGGTTTATGGGGTCGATTGCCTGGAAAAATTGCTCGTTTGTCATCACTTGAAATACTGAATGTGAGCTCAAATTTTCTATATGGTTCTGTTCCTCAAGAGCTTTCTTCGCTGAAAGCTCTCCAAACACTTGTACTTGATGACAATATCTTTGCTGGTCAGCTACCAGACTGGTTGTACTTGTTTCCAGGCATGACTGTTTTAAGTTTGAGAAACAATTCCTTTAATGGCTCTCTGCCAGAATCACTGAGTAGCTTAGAAAATCTGAGAGTTCTTTCCCTTTCACACAATCACTTCCATGGAACAGTTCCTGATTTCGGTGCCTTGAAGAATCTTCAAATACTTGAATTAGATAACAATGCATTTGGTCCAGAGTTTCCTCAACTTGGAAAGAAGTTGATTATTCTTGAATTGAGCAAGAATAAGTTCAGGTCTGGAATTCCTGATGAAGTAAGCACATATTATCAGCTTCAGCGGCTTGATATCTCCGAGAATACATTCATGGGGCCATTTCCACTGTCATTGTTGTCCCTTCCTTCTATTACTTATCTCAACATTTCTGGGAATAAATTCACTGGAATGCTATTTGAGAACATATCATGCAATAATGACCTGCAGTCTGTGGATTTGTCCTCTAACTTGTTGATTGGCAAGTTACCTAGTTGCCTCGTCTCAGATTCCAGTGATAGGATTGTAAGCTATGGTGGGAACTGTTTGGAAGACCAAGTTCAAAAGCAGCATTCCCTTTCCTTCTGCCGAAATGAAGCTTTGGCAGTTGGAGTAGTACCTCATAGAAAGAAAAGAGGTTATAAATCAGCCGTTACCTTTGGGATAGTGGGAGCCATTCTTGGAGGAACAGCAGTCGTCTTGTTAATTATGTTGGTTATTAGAAGAGTACAGACCAAGAGAATAGTGAAGAATCCTCCAACAAGATATATAACAGAGAAAGCATCCACTGGCTACACTTCCAAGTTGCTTTCTAATGCAAGATACATGTCTCAAACAATGAAGTTGGGATCACTCGGTCTGCCACCTTATCGACCCTTCTCGCTTGAAGAGATTGAATGTGCTACAAATAACTTTAGCACAGAGTGTTTCCTGGGAGAAAGTCCTCATGGGCAGATGTACAGAGGTCGGATGAAGGATGGTTCATTTATTGCCATTAAATGCATAAAAATGAAGAAAGGGTACAGCACTGAAGAATTCGTGCCTCACTTGGAGCTGATCTCAAAGCTCAGACATCGCCATTTAGTTAGTGCTCTTGGCCACTGCTTTGAGTGTTATTTAGATGATTCAAGCGTCAGCAGAATGTTCCTCATCTTTGAATATGTGACCAATGGAACACTGCAGAGCTGGATCTCTGTTGGGCATCCTAGACAGCCACTTACTTGGGCACAACGGATAGCTGCAGCAATAGGCATTGCAAAGGGCATAGAATTTCTTCATACAGGGATTGTCCCTAGTATATATTCAAACAATCTCAAAATAACAGATGTTCTATTGGATCAGAACCTTGTTGCCAAAATTTGCAGTTATAACTTGCCTTTGCTGTCTGAGGAACCGAGGAAGGTTGGCGGTGCAAGCAGTGCAATCTACCATGGTGGGTCCAAACATTCAACTGCAAAGAAAAGTATAAAAGAAGAATATAACTGTCACATATACGTGACTGGAGAAATATTGCTGGAACTCATAATTGGAAGGCCATTGAAATCCAGCAACGAAGTAGATGTCTTGAAAAAGCAGTTTGAAGCTTGTATCATAACCGATGATGCAGCGCGGAGGAGTTTGGTTGATCCAGTTATCCGCAAGGCATGCTTAGACCCATCATTGAAGACAATGATGGAAATATGTGTAAAATGCTTGAACAAAGAACCTTCAGACAGACCTTCCATTGAGGATGTTTTGTGGAATCTCCAATTTGCTGCTCAAGTGCAGGAAGCCTGGCACGGTGACTCGGAGTAG 2313 0.4142 MSMSNGLQCWLLLVLVTVIQCTNRSEQLQSSQVEILLKIKGLLNYPSILSSWHNKTDFCNIDPSSSFTVVCYEDAITQLHIIGESAAAPIQPKNFSMDSFVTTLVKLSNLKVLRLVSLGLWGRLPGKIARLSSLEILNVSSNFLYGSVPQELSSLKALQTLVLDDNIFAGQLPDWLYLFPGMTVLSLRNNSFNGSLPESLSSLENLRVLSLSHNHFHGTVPDFGALKNLQILELDNNAFGPEFPQLGKKLIILELSKNKFRSGIPDEVSTYYQLQRLDISENTFMGPFPLSLLSLPSITYLNISGNKFTGMLFENISCNNDLQSVDLSSNLLIGKLPSCLVSDSSDRIVSYGGNCLEDQVQKQHSLSFCRNEALAVGVVPHRKKRGYKSAVTFGIVGAILGGTAVVLLIMLVIRRVQTKRIVKNPPTRYITEKASTGYTSKLLSNARYMSQTMKLGSLGLPPYRPFSLEEIECATNNFSTECFLGESPHGQMYRGRMKDGSFIAIKCIKMKKGYSTEEFVPHLELISKLRHRHLVSALGHCFECYLDDSSVSRMFLIFEYVTNGTLQSWISVGHPRQPLTWAQRIAAAIGIAKGIEFLHTGIVPSIYSNNLKITDVLLDQNLVAKICSYNLPLLSEEPRKVGGASSAIYHGGSKHSTAKKSIKEEYNCHIYVTGEILLELIIGRPLKSSNEVDVLKKQFEACIITDDAARRSLVDPVIRKACLDPSLKTMMEICVKCLNKEPSDRPSIEDVLWNLQFAAQVQEAWHGDSE* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01297 770 SUPERFAMILY Protein kinase-like (PK-like) 458 757 IPR011009 -
Pte18g01297 770 FunFam Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 249 374 - -
Pte18g01297 770 Pfam Protein kinase domain 483 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01297 770 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 451 560 - -
Pte18g01297 770 Gene3D Ribonuclease Inhibitor 247 382 IPR032675 -
Pte18g01297 770 Gene3D Phosphorylase Kinase; domain 1 439 560 - -
Pte18g01297 770 Gene3D Ribonuclease Inhibitor 29 246 IPR032675 -
Pte18g01297 770 Gene3D Transferase(Phosphotransferase) domain 1 561 767 - -
Pte18g01297 770 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 389 761 - -
Pte18g01297 770 ProSiteProfiles Protein kinase domain profile. 478 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01297 770 SUPERFAMILY L domain-like 30 357 - -
Pte18g01297 770 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 561 770 - -
Pte18g01297 770 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 29 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01297 Pte-Chr18 24974340 24978824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01297 45 769 Miscellaneous Gene Families AT3G03770 61.486 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pte18g01297 Pkinase 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01297 - - qsa:O6P43_006214 1035.4