Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01249 ATGAACCCGTCGTCTTCATCGTCAAAGAGCAAAAAGAAGCAGGCACCAGCAGCAACAGCTGAGCAGAAAGAAACGTCATGGGGAGGAAGATTTCTGGGAGTTAGAAGAAGGCCATGGGGAAGGTATGCGGCTGAGATAAGGAACCCTACGACGAAAGAAAGGCATTGGCTTGGCACATTTGACACAGCTGAAGAAGCTGCTTTGGCGTACGATAGAGCAGCTAAGTCTATGCGTGGTTCTCGTGCACGCACCAACTTCTTTTACTCTGATACCCCACCAGGTTGTTCAGTGACTTCCATTATCTCGCCCGATGAACAGGCAGCTCAATATGAAAACCATGACTTCTCTGTACTCTTCCTTGAGGGTGGCTCAGTTTCCCAACAATCAGACCGGACTGCTCAATTTATTGAATGCCATTCCTGCGGTGGGTATCCGGCAATGTCAGCTGGGGGCACTTGGGTGTCTTCAGGTTTTCACCATCAGCAGGAAGAACCAACTCTCAATGTCAGTTTTGATAACCATATGAACAGCTTTAACCAATTATACGATAACAACAACATTGAGCTTCCTCCTTTGCCTGCTTCTGAAATTGATACGTCGGGTTGTTTTGGTGAGTCTAATGGGTCAAGCGCGGTCTATCAAATGGACATGGGGGTCTGGAATGGTTTGGGGTATTCGGGCAATACGAGTGGGACAGCAACATCTGCATTTAACTCCTCGTACATGGGGTTTGACACGAGCGAGTACGTGCATAGCCCGCTTTTCAGCAGAATGCCACCCGTCTCAGACACAGTTCCGGACAATTTTGATTTGGGACATTCAAGTTACTTCTTCTAA 837 0.4779 MNPSSSSSKSKKKQAPAATAEQKETSWGGRFLGVRRRPWGRYAAEIRNPTTKERHWLGTFDTAEEAALAYDRAAKSMRGSRARTNFFYSDTPPGCSVTSIISPDEQAAQYENHDFSVLFLEGGSVSQQSDRTAQFIECHSCGGYPAMSAGGTWVSSGFHHQQEEPTLNVSFDNHMNSFNQLYDNNNIELPPLPASEIDTSGCFGESNGSSAVYQMDMGVWNGLGYSGNTSGTATSAFNSSYMGFDTSEYVHSPLFSRMPPVSDTVPDNFDLGHSSYFF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01249 278 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Pte18g01249 278 MobiDBLite consensus disorder prediction 1 21 - -
Pte18g01249 278 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Pte18g01249 278 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Pte18g01249 278 MobiDBLite consensus disorder prediction 1 27 - -
Pte18g01249 278 FunFam Ethylene-responsive transcription factor 2 30 88 - -
Pte18g01249 278 SUPERFAMILY DNA-binding domain 31 88 IPR016177 GO:0003677
Pte18g01249 278 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 11 159 - -
Pte18g01249 278 Pfam AP2 domain 33 79 IPR001471 GO:0003700|GO:0006355
Pte18g01249 278 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Pte18g01249 278 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Pte18g01249 278 CDD AP2 30 86 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01249 Pte-Chr18 24622184 24623202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01249 5 270 AP2-EREBP Transcription Factor Family AT5G13910 43.796 5.14e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte18g01249 AP2 7.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01249 K09286 - qsa:O6P43_009772 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01249 18 24622184 24623202 Pte18g01249 18 24622184 24623202 RCT