Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01237 ATGGGGAAGTCTGGGGGTAAGAAGAAGAAGGGTAACTCGAATCAAGTTGCAGCTGATAAAACCACGGCAAGTGCTAATGGTGGTGTTGCTTTGGACTATTCTATTTTTTTGAAAAGAGCCCATGAGTTGAAAGAAGAAGGAAATAGGAGGTTTCAGAATAAGGACTATGTAGGTGCACTTGAGCAATATGATAGTGCTTTGAAACTAACCCCTAAGAACCACCCAGACAGGGCGGTTTTTCATAGTAATAGAGCTGCTTGTCTGATGCAAATGAAGCCTACAGATTACGAGACTGTCGTTATTGAGTGTACTCTAGCACTTCAGGTTCAGCCTAGGTTTTCTCGAGCTTTGCTTCGCAGGGCTCGAGCGTACGAGGCAATTGGGAAATACGAAGTGGCTATGCAGGACGTGCAAGTCCTATTAGCTGCTGAACCAAATCATGGGGATGCTTTAGATATTGCTCGGAGATTAAGAATGGCAGTGGGACCTCGGACAGAGACCCAACAGGACATCCAGAGCCGCCCTTCACCTGCTGCCCTGGGTGCTTCGGCAGTACGTGGTGCCCCAATTGCTGGGTTGGGGCCGAGTTTGCCTGCTCGCCCTGTACCGAAGAAGGCAAGCAATACTGCTGTTGGTTCTGATGTCTCAACTCATAATAAGCAGGAAAGGATTCAGACAATTTCACCTCTTGAGGATGGTCCTGAATCCAAATCTGAAATGCCTAAACTCTTCTTGAAGCAGTCAAAAGACTCTTCTATCTCTCTGAATCCAGGCAAGTTAAACCTGAAGGATCACTCATTACCTGTTCAGGGTCAGCACTCTAACTTTCCAGTCCGGTGGAGACCACTGAAGCTTGTTTATGATCATGACATCAGACTTGCTCAGATGCCAGTAAATTGCAATTTTCGGATTCTTAGAGAGATAGTTGGGAAAAGGTTTCCATCATCAAAATCAGTTTTGATAAAGTATAAGGACAATGATGGTGACCTAGTGACTATAACCTGTACTGAAGAACTCAAATTGGCAGAGACTTGTGTGGATAGCCATCTTCTTAAAGAACCTGATACTGAGAAAAGTGATTCTGTTTCTACATTGAGACTGCATGTTGTTGAAGTGAGCCCTGAGCAGGAGCCACCTTTACTGGAAGAAGTGGAAGAGAAACCTGTTGAGAGTGAAGGACCTAAGGGAGATGAGAGTGGATCCCATTCTTCCCTTGGTGACTCTTCTGTAGAAACTCGAGAAGTCGATGTTGATGAGAAGGAAAAAGAAACTTTAAAGGGAAAATCAGGAGTTGTGGAAGAATCTGAATGCAAAGAAGTGGAGATAGATGACTGGCTGTTTGAGTTTGCACAGCTTTTCCGCTCACATGTTGGTATTGATCCTGATGCACATGTTGACCTGCATGAGCTCGGGATGGAGTTCTGTTCAGAGGCACTTGAGGAGACGGTGACAAGTGAAGAGGCTCAAGGACTTTTTGACAAGGCTGCTTTGAAGTTCCAGGAGGTGGCTGCCTTGGCTTTCTTCAACTGGGGAAATGTTCACATGTGTGCTGCAAGAAAGCGGATCCCCTTAGATGAATCTGCTGGAAAGGAGGTGGTGGCATTGCAACTTCAAGGGGCTTATGATTGGGTTAAGGAGAAGTATATGTTGGCTAGAGAGAAGTATGAAGAGGCACTCCTGATAAAACCGGACTTTTATGAAGGATTGTTGGCTTTGGGGCAGCAACAATTTGAAGTGGCCAAACTTGATTGGTCATTTGCACTGGCCAAGAAAATAGACCTCTCAGAATGGGATTCTACAGAGACACTTAAACTTTTTGACAGTGCAGAGGAGAAGATGAAAGCAGCAACTGAAATGTGGGAGAAATTGGAGGAGCATAAAGCAAAGGAGCTGAAGGATCCAGCTGCCAGTAAAAAAGAAGAATTATTGAAACGAAGAAGGAAACAAGGCAGTGCTACAGAGGCCGAGTCTTCCAGTGTTGGAGCTCAGGTTGATACTTCTGCTGATGAAGCAGCCGAACAAGCAGCTCTTATGAGGTCTCAGATTCATCTCTTCTTGGGAAATATGCTTTTTGAACGATCCCAGGTTGAATTTAAAATAGGACGGGATGGTTGGAAGAAAAACTTAGATGCTGCTGTCGAGCGATTTAAGCTTGCTGGTGCCTCTGAGGCCGACATTTCAATGGTTCTTAAGAATCATTTTTCAAATGTAGATGCAGTGGACACGGAAAAAAAATCCAGAATCTGA 2247 0.4477 MGKSGGKKKKGNSNQVAADKTTASANGGVALDYSIFLKRAHELKEEGNRRFQNKDYVGALEQYDSALKLTPKNHPDRAVFHSNRAACLMQMKPTDYETVVIECTLALQVQPRFSRALLRRARAYEAIGKYEVAMQDVQVLLAAEPNHGDALDIARRLRMAVGPRTETQQDIQSRPSPAALGASAVRGAPIAGLGPSLPARPVPKKASNTAVGSDVSTHNKQERIQTISPLEDGPESKSEMPKLFLKQSKDSSISLNPGKLNLKDHSLPVQGQHSNFPVRWRPLKLVYDHDIRLAQMPVNCNFRILREIVGKRFPSSKSVLIKYKDNDGDLVTITCTEELKLAETCVDSHLLKEPDTEKSDSVSTLRLHVVEVSPEQEPPLLEEVEEKPVESEGPKGDESGSHSSLGDSSVETREVDVDEKEKETLKGKSGVVEESECKEVEIDDWLFEFAQLFRSHVGIDPDAHVDLHELGMEFCSEALEETVTSEEAQGLFDKAALKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKEVVALQLQGAYDWVKEKYMLAREKYEEALLIKPDFYEGLLALGQQQFEVAKLDWSFALAKKIDLSEWDSTETLKLFDSAEEKMKAATEMWEKLEEHKAKELKDPAASKKEELLKRRRKQGSATEAESSSVGAQVDTSADEAAEQAALMRSQIHLFLGNMLFERSQVEFKIGRDGWKKNLDAAVERFKLAGASEADISMVLKNHFSNVDAVDTEKKSRI* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01237 748 MobiDBLite consensus disorder prediction 380 397 - -
Pte18g01237 748 SMART tpr_5 114 147 IPR019734 GO:0005515
Pte18g01237 748 SMART tpr_5 532 565 IPR019734 GO:0005515
Pte18g01237 748 SMART tpr_5 40 73 IPR019734 GO:0005515
Pte18g01237 748 SMART tpr_5 78 113 IPR019734 GO:0005515
Pte18g01237 748 MobiDBLite consensus disorder prediction 1 20 - -
Pte18g01237 748 MobiDBLite consensus disorder prediction 375 428 - -
Pte18g01237 748 MobiDBLite consensus disorder prediction 626 666 - -
Pte18g01237 748 Gene3D Tetratricopeptide repeat domain 37 160 IPR011990 GO:0005515
Pte18g01237 748 SUPERFAMILY CAD & PB1 domains 277 343 - -
Pte18g01237 748 SUPERFAMILY TPR-like 40 588 IPR011990 GO:0005515
Pte18g01237 748 SMART PB1_new 280 372 IPR000270 GO:0005515
Pte18g01237 748 MobiDBLite consensus disorder prediction 626 652 - -
Pte18g01237 748 MobiDBLite consensus disorder prediction 409 428 - -
Pte18g01237 748 PANTHER PROTEIN CLMP1 1 743 IPR044517 -
Pte18g01237 748 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Pte18g01237 748 MobiDBLite consensus disorder prediction 209 226 - -
Pte18g01237 748 Pfam PB1 domain 280 371 IPR000270 GO:0005515
Pte18g01237 748 Coils Coil 606 626 - -
Pte18g01237 748 ProSiteProfiles PB1 domain profile. 280 372 IPR000270 GO:0005515
Pte18g01237 748 CDD PB1 283 369 - -
Pte18g01237 748 Gene3D - 282 352 - -
Pte18g01237 748 ProSiteProfiles TPR repeat profile. 40 73 IPR019734 GO:0005515
Pte18g01237 748 MobiDBLite consensus disorder prediction 191 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01237 Pte-Chr18 24535490 24538604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01237 37 158 Calmodulin-binding Proteins AT3G25230 27.820 3.32e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01237 K26538 - qsu:111997405 1073.54