Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01234 ATGGCGTTTCCTGAATCTGCCAACCGTCAATCTCTGATCCCAAGCTTCCTGTACTCTTCTTCACTGCCAAAAAAAACCACATCTCTTGAAGCTATGCTTCAGTCCACACCATTTTCCGGCGTCTCTTCTTCAACGTATCTCGATGCTTTGCCTGCATCTCCTAACAAGAGTTTCGTTATTCCTGCTCCTAGCGAGCCTGGTAAGATCGAGATGTACTCACCTGCTTTCTATGCTGCTTGCACTTTCGGTGGAATTCTCAGCTGTGGTCTTACTCACATGGCCGTCACTCCTCTTGACCTTGTCAAATGCAATATGCAGATTGACCCTGCAAAGTACAAGAGCATCTCCTCTGGATTCGGACTGTTGGCCAAGGAACAGGGTATCAAAGGCTTCTTCCGTGGTTGGGTGCCTACTTTACTCGGTTACAGTGCACAAGGTGCCTGCAAATTTGGGTTCTATGAGTTCTTCAAGAAGTACTATTCTGACATTGCTGGTCCTGAGTATGCCGCCAAGTACAAGACCTTGATCTATCTTGCTGGTTCTGCATCAGCTGAGGTTATTGCTGATGTTGCACTTTGCCCCTTTGAGGCAGTCAAGGTTCGTGTTCAAACCCAGCCTGGTTTTGCTAGGGGCTTGTCTGATGGATTGCCTAAGTTTGTCAAATCTGAAGGAGCTCTCGGGTTGTACAAGGGACTTGTTCCTCTTTGGGGTCGTCAGATTCCATATACTATGATGAAGTTTGCCTCTTTTGAGACAATTGTTGAGATGATCTACAAGTATGCAATCCCCAGACCTAAAGACCAATGCAGCAAACCACTTCAGCTTGGTATAAGCTTTGCTGGTGGATATGTAGCTGGCGTTTTCTGTGCTATTGTGTCTCATCCAGCTGACAACCTTGTCTCTTTCCTCAACAATGCTAAAGGCGCCACTGTGGGTGATGCTGTGAAGAAGCTAGGGTTGTGGGGTCTCTTCACCCGTGGTCTGCCTCTACGTATTGTGATGATTGGAACACTTACTGGAGCTCAGTGGGGAATTTATGATGCATTCAAAGTATTTGTAGGATTACCAACAACTGGTGGTGTTGCTCCTCAAGCAGCTGCTACCACTGAACTTGCTAAGGTGTAG 1125 0.4684 MAFPESANRQSLIPSFLYSSSLPKKTTSLEAMLQSTPFSGVSSSTYLDALPASPNKSFVIPAPSEPGKIEMYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGLLAKEQGIKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKYAIPRPKDQCSKPLQLGISFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPQAAATTELAKV* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01234 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 75 159 IPR018108 -
Pte18g01234 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 172 256 IPR018108 -
Pte18g01234 374 Gene3D Mitochondrial carrier domain 76 353 IPR023395 -
Pte18g01234 374 FunFam Phosphate carrier protein, mitochondrial 75 353 - -
Pte18g01234 374 ProSiteProfiles Solute carrier (Solcar) repeat profile. 273 352 IPR018108 -
Pte18g01234 374 Pfam Mitochondrial carrier protein 78 161 IPR018108 -
Pte18g01234 374 Pfam Mitochondrial carrier protein 176 260 IPR018108 -
Pte18g01234 374 SUPERFAMILY Mitochondrial carrier 78 348 IPR023395 -
Pte18g01234 374 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 46 363 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01234 Pte-Chr18 24503444 24506297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01234 9 375 Chloroplast and Mitochondria Gene Families AT5G14040 79.839 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01234 K15102 - qsa:O6P43_009745 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01234 18 24503444 24506297 Pte18g01234 18 24503444 24506297 RCT
Pte18g01234 18 24503444 24506297 Pte15g00869 15 6336760 6340391 RCT