Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01231 ATGGCTGTTCGTCCAAGCATCATTCAGGCTGTTCTGTTTGCCCTTATTGCAATAATTGCAGCCACATTGATCATCAGTCCAAACATTGATAGAGATGGTCACAGCCAAAGTCATAGGCATCCGCATCATCCACGAAAACGTCCGGACGATGGGAAGAAAACAGCTTGTGATGATTTTCCGTCGGGGATTCCACCGCCCGACACAGATATAACCTCCTACATTTGTGTTGATCAAAGGGGGTGCTGCAATTTCACTACGGTGCAGGCAGCTGTAGATGTAGTGCCTGAGTTAAGCCAGAAGAGAACAGTGATATGGATCAACAAAGGAGTCTATCTAGAGAAAGTGACTGTCCCGAAGAACAAACAAAATATTACATTGCAAGGACAAGGCTTTACTTCAACTGCCATCGCATGGAATGACACGGCTGCTTCTGCAAATGGCACATTTTACAGTGGCTCTGTCCAAGTGTTTGCTACCAACTTTGTTGCCAAGAACATCAGCTTCATGAATTTGGCACCCATTGCAAAACCTGGGGATGTAGGAGCACAGGCAGTAGCACTCAGAATAGCAGGAGACCAAGCTGCTTTCTGGGGTTGTGGATTCTTCGGAGGTCAAGACACCCTCCATGATGATAAGGGTCGCCACTATTTCAAAGACTGTCACATCCAAGGCTCCATTGATTTCATATTCGGCAATGCAAGGTCCTTGTATGAGGACAGCCGTATACTTTCCATTGCGAGTCCAGTAGAAGATCAGAGAAAAACGATAAACGGTGTTGTTACTGCACAGGGAAGAAGTTCTAACGATGAAAATACAGGCTATGTATTTCTCAACTGCGATATAGGAGGTAGTGGAAGAATATGGTTAGGTCGGGCATGGAGACCCTTTTCACGCGTTGTTTTTGCTTACACAAAAATGTCCGATATCATAGCCCCTGAGGGCTGGAATGATTTCAACGACCCTTCGAGAGATGTGACTGTGTTTTACGGAGAATACAACTGCTCGGGTGACGGAGCTGATATGAGCAATAGGGCAGCTTATGTGCAGAAACTAAACGACACACAGGCTTCTTCTTTCCTCAATGCATCGTTCATCGATGGACAACAGTGGCTTCAGTCCTTTAGCTCATGA 1131 0.458 MAVRPSIIQAVLFALIAIIAATLIISPNIDRDGHSQSHRHPHHPRKRPDDGKKTACDDFPSGIPPPDTDITSYICVDQRGCCNFTTVQAAVDVVPELSQKRTVIWINKGVYLEKVTVPKNKQNITLQGQGFTSTAIAWNDTAASANGTFYSGSVQVFATNFVAKNISFMNLAPIAKPGDVGAQAVALRIAGDQAAFWGCGFFGGQDTLHDDKGRHYFKDCHIQGSIDFIFGNARSLYEDSRILSIASPVEDQRKTINGVVTAQGRSSNDENTGYVFLNCDIGGSGRIWLGRAWRPFSRVVFAYTKMSDIIAPEGWNDFNDPSRDVTVFYGEYNCSGDGADMSNRAAYVQKLNDTQASSFLNASFIDGQQWLQSFSS* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01231 376 ProSitePatterns Pectinesterase signature 2. 222 231 IPR033131 -
Pte18g01231 376 FunFam Pectinesterase 68 376 - -
Pte18g01231 376 Pfam Pectinesterase 74 367 IPR000070 GO:0030599|GO:0042545
Pte18g01231 376 Gene3D - 67 375 IPR012334 -
Pte18g01231 376 MobiDBLite consensus disorder prediction 32 62 - -
Pte18g01231 376 SUPERFAMILY Pectin lyase-like 73 373 IPR011050 -
Pte18g01231 376 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 62 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01231 Pte-Chr18 24495707 24497241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01231 47 372 Carbohydrate Esterase AT1G05310 71.951 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01231 - - mesc:110623596 548.125