Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01221 ATGTCTGCGTCTTCATATAAAGTTGTAAACCTTGAAATCTGTTGTTTGTCTTCTAACTCAGATCTAGTTTTTAAAGACATAATAAATTCCATGGATACGGAGGAATCAAACTGCTTGACGACTTCGGTTGGAGATTTGGAGCTGCCTATTGGGTTTCGGTTCATACCTACAGATCAGGAGCTTGTTGATTATTATTTACGGGTGAAAGTGCAGGGTCTGCCATTGCCAGCTTCAGTCATTCCTGAATATGACGTGTTCCAAAAGGAACCTTACGGTTTGCCAGGTGACTTGAAAGAGAAGATGTATTTCTTTAGCGTTAGAAATGAGAATGCTCAAAGAGTTCGTTGGAGAGTCGCTGGCTCTGGTTATTGGATATCTTCTCGCAAAGACAAGCAAATCACGGATTCTCAAACCAATCAAATTGTCGGTACGAGGAAAACTATGATTTTCTATGAAGCAGAGAATAAGCGCAACATTAATAGAACGAGATGGATCATGCATGAGCTAAGCCTTGTCGGCTCTAGAATAACAACTTCCAATCCAAACCTGCAGGTGAACAATGAGGTTATGAAAAATTGGGTTGTGTATCGTATATTTCAGAAGAGAAGAGCAAGGATAAGTCACAGCCTCAGAATTCAGCACTCTGAAGAAAGGTTACGACAAATGTTGGAGGAAACTAGGCCATGTGTAATAGATCTTAGGCAGGAGCACTTCAATGGTGATGAATATCCTCCACCACCTCCTTCCCCAAGTTGCACATAA 762 0.4108 MSASSYKVVNLEICCLSSNSDLVFKDIINSMDTEESNCLTTSVGDLELPIGFRFIPTDQELVDYYLRVKVQGLPLPASVIPEYDVFQKEPYGLPGDLKEKMYFFSVRNENAQRVRWRVAGSGYWISSRKDKQITDSQTNQIVGTRKTMIFYEAENKRNINRTRWIMHELSLVGSRITTSNPNLQVNNEVMKNWVVYRIFQKRRARISHSLRIQHSEERLRQMLEETRPCVIDLRQEHFNGDEYPPPPPSPSCT* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01221 253 PANTHER NAC TRANSCRIPTION FACTOR 56 48 206 - -
Pte18g01221 253 Gene3D NAC domain 57 205 IPR036093 GO:0003677|GO:0006355
Pte18g01221 253 Pfam No apical meristem (NAM) protein 49 170 IPR003441 GO:0003677|GO:0006355
Pte18g01221 253 SUPERFAMILY NAC domain 40 201 IPR036093 GO:0003677|GO:0006355
Pte18g01221 253 ProSiteProfiles NAC domain profile. 48 201 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01221 Pte-Chr18 24413006 24414415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01221 44 204 NAC Transcription Factor Family AT5G13180 46.951 7.67e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte18g01221 NAM 7.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01221 - - qsa:O6P43_009732 186.808