Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01217 ATGATCAATTCACTTTGTGGAAGCATGGGGTCCATCAAGACGGAGAGTATTCCGCATGTCAAATCATCGCGCCCTTCTTCTCCAAGCAAGTCATCCGTTTCTCAATCAAAAAAGAGTGGCAGTGGCAGTGTTTCATGTGATTTGGAGCAGAATCCTCTAACCCCACCAAGTCTTGGCCTTCCTGGACGCAACTATGATAATCTGGAAGGAGAAGGAGAAGTGCAGTCACCTGAGAATTCGATATGGGAGTCATTTTTCTCCGATAACTTAGAGGCTGATTTCATGATATGCTCACCCGTGAGGAATGTGCCTTCACCTCAGACTTCCATGTGCAATAATAACTACAACTATGCTCATGCAATGCAGGGACAAAGTGTTTCAGGTTGTTCACCTCCTCGGTTTTCTTCACAGATAGGTTCATATTCAAGTAGCCTCAAAGGGAAGGGACTGAGTCCACTTCATAAGGTATGTAACTCTCCGAATAATGAGTATCAGTATATGCAATCAATCGAGGGTCTGTCACTGCCAGATATTGAAGAATTTCTGGAGGACTATCATAGAGATGGGTTAGAAGAAGAGTTCTCCTCACACAAACTCTCTGATATTGGAAGCTCAAACAGCTTTGACATGCCAACTAGAATTCCAGCCTTGTTGGAGAACATGACGACGACTTCATCCAAGTTTAGTGGATCGAGGAGTGAAACATCAGTCCCCCCTCATAGAGATGATCGATCTCAACTCGACCAAGAGCGTGATGTTTATCATCATAAGGCTGTCGGATCTATTGGAAGTCGTGTATCTTTATCTGAAGTCTTGAGACAAGAACGGCTGAAGGAGAAGCTACCGCGAAAACAGCACCAGCACCAACCACATCCTCAAGAACACAAAACCCTTGGCCAAAGCTTGATGGTACCTCTATCTATGGACACAGAACAGGAGCAAGACAGTGGGCTACAATTGGTGCATCTCCTTCTAGCTTGTGCAGAAGCAGTGGCCAAAGAGGACTACATGTTAGCAAGAAGGTATCTACATCATTTAAACCGTGTAGTTACTCCTTTAGGCGACTCCATGCAACGTGTTGCCTCATGTTTCACTGAAGCCTTGAGCGCACGACTGGCTGCAACCCTAGCAACAAAACGTAGCACCTCGAATGTTCCTAAACCACCTTTCTCTCCTTTCCCATCAAACTCACTGGAAATCCTAAAAATCTATCAAATTCTCTATCAAGCCTGCCCTTACGTTAAGTTTGCTCACTTCACTGCAAATCAAGCAATTTTTGAAGCGTTTGAAGCAGAAGAACGAGTCCATGTTATCGACATAGACATCCTTCAAGGCTATCAATGGCCGGCTTTCATGCAAGCCTTAGCAGCCCGTCCCGGGGGGGCTCCATTTCTCCGAATAACCGGTATCGGGCCCTCTCTAGACTGTGTGAAGGAGACAGGTAGGTGTTTGACTGAACTAGCTCATTCTCTGCATGTCCCTTTCGAATTTCACCCAGTTGGTGAACAGCTTGAAGACCTGAAATCCCATATGTTCCAACGACGAGTTGGCGAGGCCCTAGCAGTTAATTCCGTCAACCGGCTCCATCATATTACCGGAAACAGCTTAGGAAATTTACTAGCAATGATAAGGGATCAAGCCCCTAAGATATTCACCCTAGTTGAGCAAGAAGCAAGCCACAATGGGCCATATTTTCTGGGCAGGTTTCTTGAGGCATTACACTATTACTCTGCCATATTTGACTCATTAGATGCTACTTTCCCTCCTGACTCAGCTCAAAGAGCAAAGGTTGAGCAGTATATATTTGCAGCAGAGATAAGGAACATTGTTGCATGTGAAGGTGCAGAGAGAATGGAAAGGCACGAGAGATTAGAGAGGTGGAGAAAAATAATGGAAGGGAAAGGATTTCAAGGAGTACCTTTGAGTGCAAATGCAGTGACTCAGTCTAAGATATTGTTGGGTCTGTATTCATGCGACGGTTACAAATTGACGGAGGATAAAGGTTGTTTGCTGTTGGGTTGGCAAGATAGAGCAATCCTAGCTGCGTCTGCATGGAGGTGCTGA 2064 0.4525 MINSLCGSMGSIKTESIPHVKSSRPSSPSKSSVSQSKKSGSGSVSCDLEQNPLTPPSLGLPGRNYDNLEGEGEVQSPENSIWESFFSDNLEADFMICSPVRNVPSPQTSMCNNNYNYAHAMQGQSVSGCSPPRFSSQIGSYSSSLKGKGLSPLHKVCNSPNNEYQYMQSIEGLSLPDIEEFLEDYHRDGLEEEFSSHKLSDIGSSNSFDMPTRIPALLENMTTTSSKFSGSRSETSVPPHRDDRSQLDQERDVYHHKAVGSIGSRVSLSEVLRQERLKEKLPRKQHQHQPHPQEHKTLGQSLMVPLSMDTEQEQDSGLQLVHLLLACAEAVAKEDYMLARRYLHHLNRVVTPLGDSMQRVASCFTEALSARLAATLATKRSTSNVPKPPFSPFPSNSLEILKIYQILYQACPYVKFAHFTANQAIFEAFEAEERVHVIDIDILQGYQWPAFMQALAARPGGAPFLRITGIGPSLDCVKETGRCLTELAHSLHVPFEFHPVGEQLEDLKSHMFQRRVGEALAVNSVNRLHHITGNSLGNLLAMIRDQAPKIFTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQRAKVEQYIFAAEIRNIVACEGAERMERHERLERWRKIMEGKGFQGVPLSANAVTQSKILLGLYSCDGYKLTEDKGCLLLGWQDRAILAASAWRC* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01217 687 MobiDBLite consensus disorder prediction 236 251 - -
Pte18g01217 687 MobiDBLite consensus disorder prediction 1 52 - -
Pte18g01217 687 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 270 680 IPR005202 -
Pte18g01217 687 Pfam GRAS domain family 320 686 IPR005202 -
Pte18g01217 687 MobiDBLite consensus disorder prediction 222 251 - -
Pte18g01217 687 MobiDBLite consensus disorder prediction 1 76 - -
Pte18g01217 687 MobiDBLite consensus disorder prediction 279 293 - -
Pte18g01217 687 ProSiteProfiles GRAS family profile. 311 686 IPR005202 -
Pte18g01217 687 MobiDBLite consensus disorder prediction 279 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01217 Pte-Chr18 24372306 24374480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01217 314 687 GRAS Transcription Factor Family AT1G66350 44.591 3.36e-98 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte18g01217 GRAS 6.7e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01217 - - pvy:116129935 919.842