Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01213 ATGAGTAAGAACACGCCAACAGCTGAAACTCGAGATTTCCAGATTGGTTTTGCAGCAGAAAAGGACGAGACTTGCAGAAAGCAGTTGGCTCCCAAGAAGAGTTCAAGTAAAGACAGGCACACTAAGGTTGAAGGTAGAGGAAGGAGAATAAGGATGCCAGCTCTCTGTGCAGCGAGAATTTTCCAGTTGACCAGAGAATTAGGTCATAAATCTGATGGCGAAACTATACAGTGGCTTCTGCAACAGGCAGAGCCATCGATCATTGCTGCAACTGGAACAGGAACTCTACCAGCATCTGCTTTAGTAGCTGCTGGGGACTCTGTCTCTCAACAGGGGACTTCTATGTCTGCTCGATTGAACCAAAAAATGGATGACTTAAGCGGGTCCAATATCGGGTCAGCTTCTGGGACCAGTTGGAATATGGGAAGATCTCATGTGGGCACTGGTGGGGTATGGCCCCCCGCTAGTAGGTTCGGGTTGGTTTCATCATCTGAGCCATCAACGACCAGTTTAGCAAGTGAGAATTCAAATTATTTGCAGAGATTAGGTCTTACTGGTTTTAATTTGCCAGCAACAAACATGAGTCCTTTGAGTTCTACATCCATTTTAGGTGGGAGTAATCGACAGATGCCTGGTTTAGAACTTGGACTGTCACAAGATGCGACCCCACATGTCTTGAACCAGATTTATCAGCAGATGAATCCTGGTAGACTGCATCTTCACCATGCACAAGAGTATCAGCATCAGCAGACTCCTGCTATGGATAATTCACAAAGCTCAGGACAGTAG 789 0.4613 MSKNTPTAETRDFQIGFAAEKDETCRKQLAPKKSSSKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTLPASALVAAGDSVSQQGTSMSARLNQKMDDLSGSNIGSASGTSWNMGRSHVGTGGVWPPASRFGLVSSSEPSTTSLASENSNYLQRLGLTGFNLPATNMSPLSSTSILGGSNRQMPGLELGLSQDATPHVLNQIYQQMNPGRLHLHHAQEYQHQQTPAMDNSQSSGQ* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01213 262 MobiDBLite consensus disorder prediction 122 144 - -
Pte18g01213 262 Pfam TCP family transcription factor 35 125 IPR017887 -
Pte18g01213 262 ProSiteProfiles TCP domain profile. 36 90 IPR017887 -
Pte18g01213 262 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 21 162 IPR005333 GO:0003700
Pte18g01213 262 MobiDBLite consensus disorder prediction 24 49 - -
Pte18g01213 262 MobiDBLite consensus disorder prediction 122 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01213 Pte-Chr18 24338980 24340811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01213 6 230 TCP Transcription Factor Family AT3G27010 54.959 9.62e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte18g01213 TCP 1.7e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01213 - - cave:132180810 345.125