Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01210 ATGGCGTTTTCCTTTCAGTCTCAGCTATTGTTTGCAGGATGTACAGTTAAACAACCAATGAGGCCGTACAAGACATCTATTCGTACATCGCACACCACTGACCTTTTATATTACGACAGCGGCTTATCCTCAAATTCGCGTAGAATTCTCAGAGCCACCTGCGATCACTCTTGCCTTGAAGTTAAAGATGTTAGCTATCGACCACCTGGTACTCAACTCAACCTCTTAAACTCGGTTAGTTTTTGCCTCCCTGAGAAAAGGTTTGGCCTAATTTTTGGGCAAAGTGGGAGCGGTAAAACAACTCTCTTGCAGCTTCTTGCAGGACTGAACAAGCCAACATCAGGTTCCATTTGCATTCACAGATATGGTGTGGATGGACTTCCTAGTCAATGTCCTGAACCATTGGCACCTGAAAGAGTTGGCATTGTGTTTCAGTTTCCGGAAAGGTATTTTGTGGGAGATACAGTGCTTGATGAAGTTATATTTGGATGGCCAAGGAAAAAATTTGACCTTCATTTCAAGGACTATCTTGCTTTAAAACTTCAAACAGCGATGAATTGGGTTGGATTAAGTGGGATCCCATTGGCTAAAGACCCTCATTCTCTTAGCGGTGGCTACAAACGCCGTCTCGCACTAGCTATTCAGTTGGTGCAACCCCCTACAATATTGATATTGGATGAGCCTCTTGCCGGCCTTGATTGGAAAGCACGTGCTGATGTGGTGAAGCTTTTGAAGCAATTAAAGCAGGAGTTAAGTATACTTGTTGTTAGCCATGACCTCAGAGAATTAACAAGTTTAGTTGATCACTCCTGGAGAATGGAAATTGGGGGCATTCTGAAGAAGGAGCCTATGCCATTATAA 861 0.4344 MAFSFQSQLLFAGCTVKQPMRPYKTSIRTSHTTDLLYYDSGLSSNSRRILRATCDHSCLEVKDVSYRPPGTQLNLLNSVSFCLPEKRFGLIFGQSGSGKTTLLQLLAGLNKPTSGSICIHRYGVDGLPSQCPEPLAPERVGIVFQFPERYFVGDTVLDEVIFGWPRKKFDLHFKDYLALKLQTAMNWVGLSGIPLAKDPHSLSGGYKRRLALAIQLVQPPTILILDEPLAGLDWKARADVVKLLKQLKQELSILVVSHDLRELTSLVDHSWRMEIGGILKKEPMPL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01210 286 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 59 286 IPR003439 GO:0005524
Pte18g01210 286 SMART AAA_5 85 277 IPR003593 GO:0016887
Pte18g01210 286 Pfam ABC transporter 76 229 IPR003439 GO:0005524
Pte18g01210 286 PANTHER HEAVY METAL TRANSPORTER 58 282 - -
Pte18g01210 286 FunFam ABC transporter I family member 11 chloroplastic 48 284 - -
Pte18g01210 286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 278 IPR027417 -
Pte18g01210 286 CDD ABC_cobalt_CbiO_domain1 60 276 IPR015856 GO:0005524|GO:0016020|GO:0055085
Pte18g01210 286 Gene3D - 43 284 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01210 Pte-Chr18 24323359 24329336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01210 59 260 Calmodulin-binding Proteins AT2G36910 23.923 1.64e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01210 - - jre:108984557 380.948