Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01206 ATGGGTCGGTGGCGAGAGAAACTTGGAGCCTTTTACTGTAACAGATGGCTTGTCTTTGTAGCTGCAACATGGTTAATGTCATGGTCGGGTGTGGGCTACTTGTTTGGAAGCATATCACCAACCATCAAGAGCTCTTTGAATTACAATCAGAAGCAGATTGCTAGTCTGGGTGTCGCTAAGGATCTTGGTGATTGCGTTGGCTTTGTTACTGGGATCTTGTGTGAGGTGCTGCCTTTATGGGCTGCTCTTGTGGTGGGTGCTCTTGAGAATCTCATTGGTTATGGTTGGGTTTGGTTGATCGTCACGGGTCGAGCTCCAAGTTTGCCTTTGTGGGCTATGTGCATTCTTATATTTGCTGGAACCAATGGCGAGACCTTCTTCAATACAGTTTCTCTTGTGTCTTGCGTGCAAAATTTCCCAAAACAGAGAGGACTTGTTGTTGGAATTCTGAAGGGCTTTGCTGGACTTGGCGGTGCTATCTTGACACAAATTTATGCGTTAATCCATTCCCCTGATCACGCATCCCTTCTGTTTATGATTGCAGTGGGTCCAGCAATTGTGGCAATGAGCCTTATGTTTATTATCAGACCTGTTGGAGGTCATAAACAGGCAAGGCCATCTGACAATTTTAGTGCCTCATTTATCTATGGTGTTTGCCTCATATTGGCTTCCTATTTGATGGGAGTCATGATTGTCCAAGATTTGGTTCCCGTCAACCATGCCATTGTTGTGATTCTTACAGTGATCTTATTCGTTCTTCTCCTTATACCAATTGTCATTCCTGTAACATTGAGCTTTTTCGTGGACGGGAAAGCTTCAGAGGAAGAGGCACTCCTTGCAGGTCAGGCACAAGGGGAAGATCCTGTAAGACCCCAAGAGGTAGGATATGAAGTAATATTAAGTGAGTTGGAAGATGAGAAACCTAGGGAAGTAGATTTGCTTCCTGCTGCTGAAAGGCGAAAACGCTTAGACGAATTGCAGGCAAAATTATGCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTCAAAAAACGGAAAGGCCCACACAGAGGGGAGGACTTTACATTGGGACAAGCTTTAATTAAAGCTGACTTTTGGCTTCTTTTTACTTCTCTTCTCTTAGGTTCGGGATCCGGGTTGACAGTGATTGACAATTTGGGGCAGATGAGCCATTCTTTAGGCTATAGTAACACACATGTCTTTGTGTCGATCATTAGCATTTGGAACTTTCTTGGGCGTGTTGGAGGAGGCTTTGTTTCAGAAATTCTTGTAAGGGATCATGCTTATCCAAGACACATTGCCTTAGCAGTAATTCAAATAGTCATGACTGTTGGGCACATTTTCATTGGTATGGGATGGCCAGGGGCAATGTACGTTGGTACTTTGTTAATAGGTGTTGGTTATGGTGCTCACTGGTCAATAGTGCCTGCCACTGCATCTGAATTGTTTGGTTTGAAGAGCTTTGGGGCATTGTACAATTTCCTTACTCTGGCAAATCCTGCAGGCACTATAGTATTTTCCAGTCTTATTGCCAGCAGAATATATGATTCTGAAGCAGAGAAACAAAGTCATCATCATCCTCTCCAACCACGAAATTCAGGAACATTGTTGTCTAACATACTCAGTGCCCAAGAACCGCCAAAGTGCGAAGGAGCCATATGCTTCTTCCTGACTTCCATGATAATGGCAGGATTCTGCATCGTTGCTGCCATCTTGAGCTTGATTCTTGTATACAGAACTAAAATCGTTTATTCCAATCTGTATGGGAAGAGTCCTTCTGCTAGGCTCAGATAA 1791 0.4411 MGRWREKLGAFYCNRWLVFVAATWLMSWSGVGYLFGSISPTIKSSLNYNQKQIASLGVAKDLGDCVGFVTGILCEVLPLWAALVVGALENLIGYGWVWLIVTGRAPSLPLWAMCILIFAGTNGETFFNTVSLVSCVQNFPKQRGLVVGILKGFAGLGGAILTQIYALIHSPDHASLLFMIAVGPAIVAMSLMFIIRPVGGHKQARPSDNFSASFIYGVCLILASYLMGVMIVQDLVPVNHAIVVILTVILFVLLLIPIVIPVTLSFFVDGKASEEEALLAGQAQGEDPVRPQEVGYEVILSELEDEKPREVDLLPAAERRKRLDELQAKLCQAAAEGAVRVKKRKGPHRGEDFTLGQALIKADFWLLFTSLLLGSGSGLTVIDNLGQMSHSLGYSNTHVFVSIISIWNFLGRVGGGFVSEILVRDHAYPRHIALAVIQIVMTVGHIFIGMGWPGAMYVGTLLIGVGYGAHWSIVPATASELFGLKSFGALYNFLTLANPAGTIVFSSLIASRIYDSEAEKQSHHHPLQPRNSGTLLSNILSAQEPPKCEGAICFFLTSMIMAGFCIVAAILSLILVYRTKIVYSNLYGKSPSARLR* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01206 596 SUPERFAMILY MFS general substrate transporter 213 580 IPR036259 -
Pte18g01206 596 CDD MFS_Mch1p_like 15 569 - -
Pte18g01206 596 Gene3D MFS general substrate transporter like domains 315 521 IPR036259 -
Pte18g01206 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 584 - -
Pte18g01206 596 Pfam Nodulin-like 15 262 IPR010658 -
Pte18g01206 596 SUPERFAMILY MFS general substrate transporter 10 197 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01206 Pte-Chr18 24300313 24303611 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01206 5 590 Nodulin-like Gene Family AT5G14120 66.779 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01206 - - qsu:111984938 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01206 18 24300313 24303611 Pte18g01206 18 24300313 24303611 RCT