Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01205 GTATTTTGTCCAATTGTTGGTTGTGGAGCTCGCTTGACTTCTTTGGAGGACTTTGAAAATCATTACAATGCACGACATAATGCATCCTGTTCAGTGTGTTCAAGAGTCTACCCAACATCGCGGCTGCTGAGCATACATGTATCTGAAGCGCATGATTCTTTCTTCCAAGCAAAAGTTGCTCGTGGCTATGCCATGTATGAATGCCTAGTGGAAGGGTGTGGTTTGAAGTTCAAAAATTACAAGAGCAGACAACAGCATCTGGTTGACAAGCACAAATTTCCCACTTCTTTCGATTTTTTCAGAAAGGCTCGGCTCTCAAAGAAACAGAGGGAGAAGAAACAACGTAGACAAGCTGTTCACAAGAATGAGGATGCTTCTAATAAAATGGAAGTAGAAAACGAAGCTATAGATGGGCTTGTGCTAGCCGTGTCTAGACTAAGCGCTTCAGATTCCTCACCTTCATCCATTAGCTTTGGCCGACGCCATAATCGTGGCATGATGTTTGTCCCTAGAGCTCTTCACCGAGAGAAG 531 0.4388 VFCPIVGCGARLTSLEDFENHYNARHNASCSVCSRVYPTSRLLSIHVSEAHDSFFQAKVARGYAMYECLVEGCGLKFKNYKSRQQHLVDKHKFPTSFDFFRKARLSKKQREKKQRRQAVHKNEDASNKMEVENEAIDGLVLAVSRLSASDSSPSSISFGRRHNRGMMFVPRALHREK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01205 177 Coils Coil 108 128 - -
Pte18g01205 177 SMART c2h2final6 1 26 IPR013087 -
Pte18g01205 177 SMART c2h2final6 28 51 IPR013087 -
Pte18g01205 177 SMART c2h2final6 66 91 IPR013087 -
Pte18g01205 177 PANTHER UNCHARACTERIZED 1 175 IPR039258 -
Pte18g01205 177 ProSitePatterns Zinc finger C2H2 type domain signature. 68 91 IPR013087 -
Pte18g01205 177 ProSitePatterns Zinc finger C2H2 type domain signature. 30 51 IPR013087 -
Pte18g01205 177 MobiDBLite consensus disorder prediction 108 127 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01205 1 177 C2H2 Transcription Factor Family AT5G14140 67.935 4.90e-91 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte18g01205 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01205 - - tcc:18601032 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01205 18 24297549 24298416 Pte18g01205 18 24297549 24298416 RCT