Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01185 ATGATCGTAGATGATTCTTTGTCTCTGTTTCTGAAGCGAAGGAGGCTTATCAGCATGGATCCCATCGAGGCTGAAGCTGCCAAGGCCAAGTTTGCAGCTATCAAGGAAAAACTTGGACGGGAGATCCGTGTATTTGAGACTACATCACTTTCTCCATCACCAAGTAATTCCCCAAACAATGTAGATGAGAATGATCACTTTTACGAATTTACTGCTGAAGATTACTATAGGATTTTAGCAACTAAAAAAGAAGATAAACATTTAAAGACACGGAAAATCAGAGAAGCCGAAGAGGCAGCTCGGAGGTCAAGAATAACAAAGGCAATTATTAGGGTACGTTTCCCCGATAATCACACCTTAGAGGCTACATTTAAGCCATCAGAAACAATCCAGAGTCTGATTAATCTAATTTCTAAAGTGGTTGCTCACCCAGAACAGCCATTTTATATATACACAACCCCTCCTAAGAAGCTCATCAAGGACGTGTCTCAAGATTTTTATAGTGCTGGCTTTGTTCCTGGTGCTATTGTGTACTTCTCATATGATGTTCCGAAAGATGATAGCAGTTCTGCTGATCCCACTAGCTCTTTCCTTCAAGAGGATATCCTATCGTTGAAAGGTTTAGAACATGCCGCGGATCAGGGATCAAAACCAGAGCCTTCTGAATCTGTAACAGAACCTGAAGCCGCAGTTCTCCCTGCTGCTCAACAACCTAAACCTGCCGAGAAAAAGCTTGTAAAACCAAAGTGGTTGAAAATGTGA 762 0.4173 MIVDDSLSLFLKRRRLISMDPIEAEAAKAKFAAIKEKLGREIRVFETTSLSPSPSNSPNNVDENDHFYEFTAEDYYRILATKKEDKHLKTRKIREAEEAARRSRITKAIIRVRFPDNHTLEATFKPSETIQSLINLISKVVAHPEQPFYIYTTPPKKLIKDVSQDFYSAGFVPGAIVYFSYDVPKDDSSSADPTSSFLQEDILSLKGLEHAADQGSKPEPSESVTEPEAAVLPAAQQPKPAEKKLVKPKWLKM* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01185 253 Gene3D - 28 178 - -
Pte18g01185 253 Pfam UBX domain 106 164 IPR001012 GO:0005515
Pte18g01185 253 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 253 IPR044232 GO:0032984|GO:0051117
Pte18g01185 253 CDD UBX2_UBXN9 108 181 - -
Pte18g01185 253 MobiDBLite consensus disorder prediction 208 253 - -
Pte18g01185 253 ProSiteProfiles UBX domain profile. 103 179 IPR001012 GO:0005515
Pte18g01185 253 SUPERFAMILY Ubiquitin-like 82 179 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01185 Pte-Chr18 24123461 24126088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01185 36 128 C2H2 Transcription Factor Family AT2G01650 35.052 4.90e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01185 K15627 - qsa:O6P43_004765 315.849