Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01169 ATGGAGAGTCCCCACAAACAGTCCCTGAGTTACATGATGAGTTTCTCTCCCAACAGTGTTGCTTCCAATGTTGCAATGGATGGAATGGGGAATTGCAGTGTTGGCAATGCGTGGAGAGTCCCGCAATGGGATGCAGTGGATACCTATGAGTCCATTAAAGGGAAGGAAGGATTGGAACGCAAAGGGAGTTGGAAGACAGATGAGAAAAGAGCAGAAAGAGTGTTGAGATATAAGGAGAAGAGACAGAGCAGACTCTTCTCTAAGCGAGTACGTTATGAAACGCCCACGCATGAAGGGTCGATTTGTGAAGAGGTGGGAGGTGAAGTTGATGTACAAGAACAAGTTTAA 348 0.4626 MESPHKQSLSYMMSFSPNSVASNVAMDGMGNCSVGNAWRVPQWDAVDTYESIKGKEGLERKGSWKTDEKRAERVLRYKEKRQSRLFSKRVRYETPTHEGSICEEVGGEVDVQEQV* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01169 115 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 40 93 - -
Pte18g01169 115 Pfam CCT motif 70 93 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01169 Pte-Chr18 24029066 24030096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01169 32 94 C2C2-CO-like Transcription Factor Family AT1G73870 38.806 5.80e-07 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte18g01169 CCT 7.8e-07 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01169 - - cave:132181466 67.0106