Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01163 ATGGTGGAGTTTTGGCCATTTACCTTAGCTCTCTTTCTATTTCTACCTGTTGCTTATCTACTACTGAAACATCTTACAGTGTCAAGTACTTACCCAAAACAAATACCAGAGGGAACCATGGGATGGCCTGTTGTGGGAGAAACCCTTAGTTTTCTCAAGCCCCACCAGTCATACACCATGGGAAGCTTCTTGCAGGATCGTTGTTCTAGATATGGTAAAGTATTCAAATCACATCTGTTTGGTTCCCCAGCCATAGTTTCTTGTGATCATGAACTCAACACGTATATCCTTCAAAACGAAAGGAAGCTATTCCCACCCAGTTACCCAAAGGTGATGCATGACATTCTTGGTGAGTATGGTATGATCCTTATCACAGGAGATATTCACAAGAAGCTAAGGAATGTTATTGTCAACATCGTGAGAGATACAAAGTCTGAGTCTCATTATCTTCGTTGCGTTGAAAAGCTGACACTCTCCACACTGAAGTCATGGGTAGATTGCAAGGAGGTTGCTTTCTATGAAGAAGCTAAACAAGTTGCACTCCATGTCATGCTTCAGTACCTTCTTCACATCGATCTAGAGGAGCCAGTGGCCTTGAAGTTATTGACTGATTTTGAAACTTACATCAAAGGTTTTGTTTCTTTGCCATTGAAGTTACCTGGGACAGCTTATACCAAAGCAATGAAGGCGAGAGTAAGGGTGATCTCATCCCTCAAAGAAATCTTACAAGAGAGGAGAAGCAAAGGTTTCGATAGGCTTGCTGAAGGTGGAGACTATTTGCATATCATTCTTGTTAATGAAAACTTGAATGAAGAGGAGATGGTGAGCCTCGTATTTGACATGTTGTTTGGGGGATACGAGACAACTGCAAAGCTCTTATCCTTGGTTGTCTATTTTCTTTCCAAAGCACCAAATGCTTTCCAAAAACTTAAGGAAGAACACGAAACAATCAGGAGAAGCAAGAAGGATGGGGAACCCTTGAGCTGGGAAGACTACCAAAATATGAAGTTCACTAACAATGTTATATATGAAGCTAGCAGATGTGGCAACATAGTCAAATTCCTGCACAGGAAAGCTCTTAAAGATATCAAGTACAAAGATTTTGTCATACCCTCAGGTTGGTTGGTTGTCCCTGTCCTGTCAGCCCCACATTTGGATTCGACCATTCATGAAAATCCTCAAGAATTTAATCCTTGGCGATGGGAAGACGAGACAACAATGAAGAAGGTGGCACCATTCGGAGGTGGTCCTCATCTCTGTCCTGGTTTTGATTTGGCTAAAGTGGAGATATCATTCTTCCTCCATCATTTTATCCTCAACTATAGGTGGAAAACCAAGGTAGATGAGTATCCTCTTGCTTACCCCTATGTGGAGTTCACCAGAGGATTGCAGCTAGAAATTAAACCTGTGATGGACATGTGA 1422 0.4177 MVEFWPFTLALFLFLPVAYLLLKHLTVSSTYPKQIPEGTMGWPVVGETLSFLKPHQSYTMGSFLQDRCSRYGKVFKSHLFGSPAIVSCDHELNTYILQNERKLFPPSYPKVMHDILGEYGMILITGDIHKKLRNVIVNIVRDTKSESHYLRCVEKLTLSTLKSWVDCKEVAFYEEAKQVALHVMLQYLLHIDLEEPVALKLLTDFETYIKGFVSLPLKLPGTAYTKAMKARVRVISSLKEILQERRSKGFDRLAEGGDYLHIILVNENLNEEEMVSLVFDMLFGGYETTAKLLSLVVYFLSKAPNAFQKLKEEHETIRRSKKDGEPLSWEDYQNMKFTNNVIYEASRCGNIVKFLHRKALKDIKYKDFVIPSGWLVVPVLSAPHLDSTIHENPQEFNPWRWEDETTMKKVAPFGGGPHLCPGFDLAKVEISFFLHHFILNYRWKTKVDEYPLAYPYVEFTRGLQLEIKPVMDM* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01163 473 CDD CYP90-like 67 469 - -
Pte18g01163 473 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 FunFam Cytochrome P450 724B1 30 468 - -
Pte18g01163 473 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 Pfam Cytochrome P450 36 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 PANTHER CYTOCHROME P450 26 32 446 - -
Pte18g01163 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Pte18g01163 473 SUPERFAMILY Cytochrome P450 31 456 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01163 473 Gene3D Cytochrome P450 26 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01163 Pte-Chr18 23972736 23975747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01163 40 365 Cytochrome P450 AT5G14400 56.364 1.85e-131 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01163 K12639 - qsa:O6P43_004724 634.409