Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01158 ATGCCGGATTCATTTTACCATATCTTAAGTGAGGAGAAAATGAAGACACTGAACGAGTGGAACTTTGACCATCCTGATGCATTTGATACGGAGCTTTTGCTTTCATGCTTGGAGAAATTGATAAATGGAATGGCTGTTAGTATACCGAATTATGACATCAAGAGCAATCAAAGGCTTGAACCTGCACGTCAGGTCAACCCTTCAGATGTCATTATTTTAGAAGGAATATTAGTTCTTCATGATTCTCGTGTTCGTGATGTCTTGAACATGAAGATCTTTGTTGATGAAGATTCTGATGTGCGTCTTGCTAGGAGAATTGAACGTGATACTATTGAACGAGGGAGGAATGTCAAAAATGTGCTCGATCAATATGCAAGATTCGTGAAACCCAGCTTCGATGAGTTTGTACAGCCTACGAAGAAATACGCCGATATCATTATTCCTCGTGGAAGTGATAATGATGTCGCCATAAATTTGATAGTGCAGCATATACACACAAAACTAGGTCAGCATGCTCTGTGCAAAATATATCCAAACCTCTTCGTTTTATTTTCAACATTTCAGATAAGGGGAATGCATACGCTTATACGTGATGTCAGAACGACGACACACGACTTCGTGTTTTATTCAGACCGTCTTATCCGCTTGGTCGTGGAGCATGGACTTGGTCATCTTCCTTTTACTGAAAAGCAGATCATAACTCCAACAGGTTCTGTTTATACCGGTGTCGAATTCTGTAAAAGGCTGTGTGGAGTCTCAACCATTAGAAGCGGTGAAAGCATGGAGAACGCATTGCGCGCGTGCTGCAAAGGAATCAAAATTGGAAAAATTCTCATTCATAGAGAAGGAAACACTGGGCGGCAGGTCGGTCATAGGACCTGTCTCACATTTTTTGCATTTCCATATTAA 909 0.4092 MPDSFYHILSEEKMKTLNEWNFDHPDAFDTELLLSCLEKLINGMAVSIPNYDIKSNQRLEPARQVNPSDVIILEGILVLHDSRVRDVLNMKIFVDEDSDVRLARRIERDTIERGRNVKNVLDQYARFVKPSFDEFVQPTKKYADIIIPRGSDNDVAINLIVQHIHTKLGQHALCKIYPNLFVLFSTFQIRGMHTLIRDVRTTTHDFVFYSDRLIRLVVEHGLGHLPFTEKQIITPTGSVYTGVEFCKRLCGVSTIRSGESMENALRACCKGIKIGKILIHREGNTGRQVGHRTCLTFFAFPY* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01158 302 Pfam Phosphoribulokinase / Uridine kinase family 12 156 IPR006083 GO:0005524|GO:0016301
Pte18g01158 302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 160 IPR027417 -
Pte18g01158 302 PANTHER URIDINE KINASE 3 284 - -
Pte18g01158 302 PRINTS Uridine kinase signature 43 58 - -
Pte18g01158 302 PRINTS Uridine kinase signature 99 109 - -
Pte18g01158 302 PRINTS Uridine kinase signature 135 148 - -
Pte18g01158 302 PRINTS Uridine kinase signature 113 124 - -
Pte18g01158 302 SUPERFAMILY PRTase-like 170 290 IPR029057 -
Pte18g01158 302 Pfam Uracil phosphoribosyltransferase 185 289 - -
Pte18g01158 302 CDD UMPK 3 167 IPR000764 -
Pte18g01158 302 FunFam Uridine kinase 1 170 - -
Pte18g01158 302 Gene3D - 2 168 IPR027417 -
Pte18g01158 302 Gene3D - 169 298 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01158 Pte-Chr18 23953812 23958050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01158 3 289 PRT Gene Family AT3G27440 76.307 8.89e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01158 K00876 - qsa:O6P43_008877 491.5