LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte18g01151	ATGGATTCCATGTCAGAATCTCAGAGTACTTCAGCATCTGCGGAAGATAACTATCTTCCTTCAACATTTGAGACAGCCCTTCCTTCACAGCCTTCTCCGGCTAAATCATCTGCAAACCTTGCAACCTCTTACTTGAACGGGGACAGTCATGGTGTGACGGTTGTTCCCCATTCTAATGGATATGTCATCAGTCGAAATCATACTCACCCCTGTCACCAGGCAGTAAAAAAGATACAAAACATGGGAAAAGAATGCCAACTGAATGGTAAATTATACCATGTGAGCCCCAGTAATGTGCTTAATCAGAAGGAAGAAATTTGTTGTTCAGGGCAGCTTTCTACTGTGGAAACTGAATTGAGCAGCAAGGAACCGATTTTTGATTCAGATACTTTTGATTTAAGCTGTCAATTAGAATGTGGAATCACTGTTTCAAGTTCACGAAAAGGAGTCGAGCCTATGAAAAGCTGCCACCAATCAGAGGTCGCCATTTCTTCCAGTCCTCAGAATAGTTTGTATGCTACTACCTTGTATGCAGAAGCCAAACGAAGCTTCACTAACACAGAAGTTAGTGAATTCATGAGTATTGTGAATAAGTCAGGTGACAGTGGTGAAACTTCTTATTCTTGCGATTTTAACGAGAGTCGGAAGACCAGCATTTACAGAGAGAGTACTGGTAGTGATGTTAGTGAAGAAAGCAGCTCCAGTAGCTTCAGTAGTGCTTCATACAAACCTCACAAATCAAACGATGTTAGATGGGAAGCAATTCAAGCCACTAGATGCCAATCTCGTGATGGGGTGCTGGACATGGGACATTTTAAGTTGTTGAGGAAATTGGGATATGGAGATATAGGAAAAGTATTTCTAGCTGAACTGAAAGGAACTAGAACCTGTTTTGCCATGAAGGTTATGGAAAAGGCCGCTCTTGCTAGTAGAAAAAAACTTCAGAGGGCTCAAACAGAAAGAGAGATACTGCAATGTCTGGACCATCCGTTTCTTCCTACGCTCTACGCACACTTTGAGACAGATGAATCCTCTTGCTTGGTGATGGAGTACTGTCCTGGTGGGGATCTGCATGCTCTTAGGCAAAAACAACCTGGGAAGTACTTCCGGGAGCATGCTGCAAGGTTCTATGTTGCAGAGGTTCTCCTTGCTTTGGAGTATCTGCACATGCTTGGGATAATTTACAGAGACCTTAAACCTGAGAATGTATTAGTGAGAGAAGATGGACACATAATGTTGTCCGATTTTGACTTGTCTCTAAGATGTGCCGTGTCCCCAACTGTGGTTCGATCCTCAAATTCAAGCTTGCTGCATAAAAACTCAGGATACTGCATCGAGCCTGCTCGAATTGGGCCAAGTTGTGTGATGCAGCCAGATTGCATTCAACCTGCATGTTTCACGCCCCGCTTTCTTTCTGGAAAGGGGAAAAAGGATAAAAAGATCAAACTGAAAAATGAAGTATCCAATCAAGTAGCCGTTCTACCAGAACTCATAGCTGAGCCTACGGATGCAAGATCCATGTCCTTTGTCGGTACACATGAATATTTAGCTCCTGAAATAATTAAAGGTGAAGGGCATGGTAGTGCTGTAGATTGGTGGACATTTGGGGTCTTCCTCTATGAGCTCTTGTTTGGGCAAACACCTTTTAAGGGGGATGGGAATCGAGCAACTCTGTTTAATGTGGTCGGGCAAACCTTGAGATTTCCTGAATCTCCTACAGTCAGTTTTGCTGCCAGGGACTTGATCAGGGGTTTACTTGTTAAGGAGCCTAAGCGTCGTCTTGCTTATAGGCGTGGAGCCACTGAAATCAAACAGCACCCCTTTTTCCAGAGCATCAATTGGGCTCTCGTTCGTTGTACTAGTCCTCCTCAGGTGCCTAGACAAGCCTTGATGGATTTTCAAGCTAGAAATAACGCAACAAAAGCAGTCATGTCTCAGAAGGGACCTAGTGTGGATGTTGAGACTTCAAGCAACTATCTTGATATAGGTTTCTTCTGA	1998	0.4359	MDSMSESQSTSASAEDNYLPSTFETALPSQPSPAKSSANLATSYLNGDSHGVTVVPHSNGYVISRNHTHPCHQAVKKIQNMGKECQLNGKLYHVSPSNVLNQKEEICCSGQLSTVETELSSKEPIFDSDTFDLSCQLECGITVSSSRKGVEPMKSCHQSEVAISSSPQNSLYATTLYAEAKRSFTNTEVSEFMSIVNKSGDSGETSYSCDFNESRKTSIYRESTGSDVSEESSSSSFSSASYKPHKSNDVRWEAIQATRCQSRDGVLDMGHFKLLRKLGYGDIGKVFLAELKGTRTCFAMKVMEKAALASRKKLQRAQTEREILQCLDHPFLPTLYAHFETDESSCLVMEYCPGGDLHALRQKQPGKYFREHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTVVRSSNSSLLHKNSGYCIEPARIGPSCVMQPDCIQPACFTPRFLSGKGKKDKKIKLKNEVSNQVAVLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGQTPFKGDGNRATLFNVVGQTLRFPESPTVSFAARDLIRGLLVKEPKRRLAYRRGATEIKQHPFFQSINWALVRCTSPPQVPRQALMDFQARNNATKAVMSQKGPSVDVETSSNYLDIGFF*	666

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte18g01151	665	FunFam	Serine/threonine-protein kinase D6PK-like	270	355	-	-
	Pte18g01151	665	CDD	STKc_phototropin_like	271	629	-	-
	Pte18g01151	665	MobiDBLite	consensus disorder prediction	1	38	-	-
	Pte18g01151	665	FunFam	serine/threonine-protein kinase D6PK-like	356	423	-	-
	Pte18g01151	665	Gene3D	Phosphorylase Kinase; domain 1	271	355	-	-
	Pte18g01151	665	MobiDBLite	consensus disorder prediction	222	244	-	-
	Pte18g01151	665	Gene3D	Transferase(Phosphotransferase) domain 1	504	627	-	-
	Pte18g01151	665	SUPERFAMILY	Protein kinase-like (PK-like)	253	639	IPR011009	-
	Pte18g01151	665	PANTHER	FLIPPASE KINASE 1-RELATED	116	635	-	-
	Pte18g01151	665	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	393	405	IPR008271	GO:0004672\|GO:0006468
	Pte18g01151	665	ProSiteProfiles	Protein kinase domain profile.	272	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte18g01151	665	Gene3D	Transferase(Phosphotransferase) domain 1	356	423	-	-
	Pte18g01151	665	Pfam	Protein kinase domain	273	423	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte18g01151	665	Pfam	Protein kinase domain	506	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte18g01151	665	SMART	serkin_6	272	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte18g01151	665	FunFam	serine/threonine-protein kinase D6PK-like	504	627	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte18g01151	Pte-Chr18	23883747	23887852	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte18g01151	158	666	AGC Kinase Gene Family	AT3G27580	69.305	0.0	663

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Pte18g01151		Pkinase	2.1e-38	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte18g01151	K08286		-	zju:107403814	811.986