Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01146 ATGGACACCATCGCAGATGATATTCGGAGCCTAAACCCAGATTTGCAAGTAGATGATTTGCACAATGGCACCCTCATGATATGTGAATCAAAAGTGTTAAACAGAATTGATTCCATGTGGTTGTATGATGACACTGTCGGGAAATCTCTTCCAAATTTATTTGAGCAGCATGTGTTGGTTTTGGTCCTCAACTATGTTCTCGTCTACATTTTCAAACTTCTACGCCCACCTGACATCTCTGCACAGATTCTTGTTGGAGTGTTAATAGGGTCATCTAAGATATTGGGAGGCCATGTGACGAATTTCTTTCAGAAGATATTCCCCTTACAAGAAATTTCAACCACGGAAACCATTGCTAACTTGGGATTGGTATATTTCATGTTCATGGTTGGCCTGGAAACAGACATCAGACCAATTAAGCGCGCAGGAAAGAAGGCTATTGCCTTGGCTGCCGCTGGTTTTGCTGTAGGTGCAGCTGCAGGATATGGCTTATACTTTCTATATGTGAGTGACATGGGAAGTAATCCGATGCCTCCAAAGTTTGGAGGAATATCGAACCCAGAGAGAGCCTTGTTCTGGGCGGTTGCTCTCAGTGGCACACAGTTTCCTGACCTGGCGAAGATACTCACAAGTCAAAAACTTATTAACTCAGATTATGGGCAGTTAGCTCTCATTATAGTACTCATCAATGCTTTATTTTCATGGATATTCGTTGTGGCAACACTTGCTGCAGTTCAAGAGAATCAATTGCAAGTTGTCTTGACCAATATAGCTTTCACCGTAGTTTGTTTTTCTGTGATCCGTCCATTCTTCAGGTGGCTATATGCTCATACAACAGATTATCATTCTGAGATGGAGCAAGCACTTGTGACAATGTGCTTGTTCGGGGCAGTGTTCTTCGGGTTCAAGTTTCCTGTGAACTCAATCACAAAGGATGCAGCGTATCAGATAATCACTGATGAGTTGATGCTGGATGGGGCACCAAGGCTCAACTTGGCGTCCTTTGTTACCACCTGGATGGAGCCTGAGTGTGATAAGCTCATCTCAGCCTCACTCAACAAGAACTATGTCGACATGGATGAGTACCCTGTTACCACTGAGCTCCAGAATCGGTGTGTGAACATGATAGCAAGGTTGTATAATGCTCCTGTTGGAGAAAATGAACCTTCAGTTGGCGTGGCAACTGTGGGTTCTTCAGAAGCAATCATGTTGGCAGGTCTGGCATTCAAAAGGAAATGGCAGCTGGATGTATGCTGGGAGAAGTTTGCTAGATACTTTGAGGTGGAACTGAAGGAGGTGAAGCTTTCAGAGGGATATTATGTAATGGACCCGGAGAAAGCAGTTGAATTGGTAGATGAGAATACCATATGTGTTGCTGCAATTCTGGGGTCAACTTTGACAGGAGAATTTGAGGATGTGAAACTTGTTCATGAACTTCTTAGTAAAAAGAATAAGGAGACAGGATGGGATACCCCAATTCATGTTGATGCTGCTAGTGGAGGGTTCATAGCTCCATTTCTCTACCCTGATCTTGAGTGGGATTTTTGTCTTCCATTAGTGAAAGGCGTCAATGTCAGTGGTCACAAATATGGGCTTGTCTACCCTGGTGTTGGATGGGTTGTCTGGAGGAGTAAGGAGGATTTGCCAGAGGAGCTCATCTTTCACATTAACTATCTTGGAGCTGATCAACCTACTTTCACCCTCAATTTCTCAAAAGCTTCTTGA 1725 0.4365 MDTIADDIRSLNPDLQVDDLHNGTLMICESKVLNRIDSMWLYDDTVGKSLPNLFEQHVLVLVLNYVLVYIFKLLRPPDISAQILVGVLIGSSKILGGHVTNFFQKIFPLQEISTTETIANLGLVYFMFMVGLETDIRPIKRAGKKAIALAAAGFAVGAAAGYGLYFLYVSDMGSNPMPPKFGGISNPERALFWAVALSGTQFPDLAKILTSQKLINSDYGQLALIIVLINALFSWIFVVATLAAVQENQLQVVLTNIAFTVVCFSVIRPFFRWLYAHTTDYHSEMEQALVTMCLFGAVFFGFKFPVNSITKDAAYQIITDELMLDGAPRLNLASFVTTWMEPECDKLISASLNKNYVDMDEYPVTTELQNRCVNMIARLYNAPVGENEPSVGVATVGSSEAIMLAGLAFKRKWQLDVCWEKFARYFEVELKEVKLSEGYYVMDPEKAVELVDENTICVAAILGSTLTGEFEDVKLVHELLSKKNKETGWDTPIHVDAASGGFIAPFLYPDLEWDFCLPLVKGVNVSGHKYGLVYPGVGWVVWRSKEDLPEELIFHINYLGADQPTFTLNFSKAS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01146 574 SUPERFAMILY PLP-dependent transferases 280 573 IPR015424 -
Pte18g01146 574 NCBIfam glutamate decarboxylase 302 574 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte18g01146 574 PANTHER GLUTAMATE DECARBOXYLASE 416 574 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pte18g01146 574 Pfam Pyridoxal-dependent decarboxylase conserved domain 308 415 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pte18g01146 574 Pfam Pyridoxal-dependent decarboxylase conserved domain 416 572 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pte18g01146 574 Gene3D - 338 574 IPR015421 GO:0003824
Pte18g01146 574 Gene3D - 52 309 IPR038770 -
Pte18g01146 574 Pfam Sodium/hydrogen exchanger family 59 307 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01146 Pte-Chr18 23816665 23820037 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01146 302 574 Calmodulin-binding Proteins AT5G17330 80.205 2.01e-171 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01146 K01580 - jre:108993168 493.041