Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01133 ATGCATTTGTTCAGTTCCAGACATATAGTTTCATCATGCCTCTTGTTGTACATCTTCACATTCATTAGCATGTTCTCCTTGTGCTTGATTCCTTCACTTGCTGATCCAAGAATCTCGCAGTCTGGGATCTACTGCAGCAAGTCCAGACCTCCACCTAACACAACCATCATTCCTAGTTTTGTTAAAGAAATGGAGGGCCTATCTCAGAAAGTTATTGCTCAACACTGGGGTACGAGCTTTGTCAACTCCACCGTACCAATGTACGGCTTAGCTCAATGCTATGAAGACCTGTCTCATATTGACTGCCTTCTATGCTTTGCTGCTTGCCGTACAAGGCTCCCTCGCTGCCTTCCTTCTGTCTCTGGCCATTTATACCTTGATGGTTGCTTCCTGCGCTATGACAACTACAGCTTCTACTCAGAATACATAAACCCTTTAAGGGATACTGTGAATTGCAGCTCCAAAAATGGTATGGTCGTGGATGAAAGAGAAAAGTTGGATTTTTCAAACAGCCTAAGGTTTGTAATTAGCAATGTGACAAAGACTGCTGTAGCAAGGGGTAGGAGGTTTGGTTTAGCAGAAGCGAAGGGAGTGTATGCCTTGGCGCAGTGTTGGAACACTATTAGCTCTAATGACTGTAGAAAGTGTTTGGAGAAGGCAGGAAACGAGATTTTAGAGTGTGCTCCAAAAAGGGATGGAAGGGCTTTGTATGCTGGTTGTTATTTGAGATATTCAACTGAGAAATTGGACAACGAAGATGGATCAGAAATTGGAGGACCGACTCCAAATAGAGGTGCCATTATAGCAATAATTCTTGCTGCTGCTGCTATATTGATGCTATCAATCTTTACTATATATGCAACATTTGTGAGATTATCAAAGATCAAAGAAGGTAAGAATGTGAAGTGTATGAAACTACAACCCCAACTTGAAGTTTTGGAATGGAGTCTTCTATTAGGATGCTGCTTTCAAATTTTCTCATATTTTTGCTTCAATCACAACAATCTCCGCCAGGTTTCATTTTCCTTTAACAAGTCAAGTTTAAATTTCAAGTATGAGACACTCGAAAAGGCAACAGATTATTTCAATCCTAAAAGGAAAATAGGCCAAGGGGGAGCCGGTTCAGTGTTCAAGGGAATTCTTCCGAATGGTCAGGTAGTAGCTGTGAAGAGATTGATCTTCAACACCAGGCAATGGGTTGACGACTTTTTCAATGAAGTAAATTTGATTACTGGAATTCAGCACAAAAACCTTGTCCAGCTTTTAGGATGCAGCATTGAAGGCCCAGAGAGTCTGCTAGTTTTTGAGTACATACCAAACAAAAGCCTTGATCATTTCCTTTTCGCAGATAAAACCAGAACTCAGATTTTGGACTGGAAGCAGCGGTATAATATTATTGTTGGAACAGCTGAAGGACTGGCATATCTTCATGGTGGCACCAAAATAAGAATAATACACAGAGACATCAAAAGCAGTAATGTCCTGCTGGATGAAAGTCTCGCTGCAAAAATCGCTGACTTCGGCCTAGCTCGGTGTTTTTCTGCTGATAGGACTCATCTGTCTACCGGAATTGCCGGTACACTGGGTTATATGGCTCCGGAATATTTACTCCGAGGGCAGCTTACAGAAAAAGCTGATGTCTATAGCTTTGGAGTGCTAGTACTTGAAATTGTCTCTGGCAGAAGGACCACCGCATTTACAGAAGAGGGTTGTTCCCTTTTACAAACAGTTTGGAAATTCCACAGAATCAACAGACTAGAAGATGCTGCTGATCCTAGCTTGGGAGATAATTTTCCACCAACAGAAGTTTGTAATGTTCTTCAAATTGGGCTTCTCTGCACACAAGCTTCAGCTGCTTTGAGGCCATCCATGGATGAAGTTGTAAGGATGTTGATCAATAGAAGTTCGGATATTCCTTTGCCCACTCAACCCCCTTTTGTAAATGCTAGACGAAATGACTCGGACAACTCCATGAAAACGTACAGCGCTAATAGCTTGTTGACGAGTGCATTAAGGAACGTTGAATTGTCCATCAGTACTACCGAGTCTTCTAACATGCAGAGTTCAGAAGGGCCATCAAGAAGTGAAGACTCACGAGGAAGTAAGCTTTAG 2112 0.42 MHLFSSRHIVSSCLLLYIFTFISMFSLCLIPSLADPRISQSGIYCSKSRPPPNTTIIPSFVKEMEGLSQKVIAQHWGTSFVNSTVPMYGLAQCYEDLSHIDCLLCFAACRTRLPRCLPSVSGHLYLDGCFLRYDNYSFYSEYINPLRDTVNCSSKNGMVVDEREKLDFSNSLRFVISNVTKTAVARGRRFGLAEAKGVYALAQCWNTISSNDCRKCLEKAGNEILECAPKRDGRALYAGCYLRYSTEKLDNEDGSEIGGPTPNRGAIIAIILAAAAILMLSIFTIYATFVRLSKIKEGKNVKCMKLQPQLEVLEWSLLLGCCFQIFSYFCFNHNNLRQVSFSFNKSSLNFKYETLEKATDYFNPKRKIGQGGAGSVFKGILPNGQVVAVKRLIFNTRQWVDDFFNEVNLITGIQHKNLVQLLGCSIEGPESLLVFEYIPNKSLDHFLFADKTRTQILDWKQRYNIIVGTAEGLAYLHGGTKIRIIHRDIKSSNVLLDESLAAKIADFGLARCFSADRTHLSTGIAGTLGYMAPEYLLRGQLTEKADVYSFGVLVLEIVSGRRTTAFTEEGCSLLQTVWKFHRINRLEDAADPSLGDNFPPTEVCNVLQIGLLCTQASAALRPSMDEVVRMLINRSSDIPLPTQPPFVNARRNDSDNSMKTYSANSLLTSALRNVELSISTTESSNMQSSEGPSRSEDSRGSKL* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01133 703 MobiDBLite consensus disorder prediction 679 694 - -
Pte18g01133 703 FunFam Cysteine-rich receptor-like protein kinase 2 332 437 - -
Pte18g01133 703 Pfam Protein tyrosine and serine/threonine kinase 365 631 IPR001245 GO:0004672|GO:0006468
Pte18g01133 703 FunFam Cysteine-rich receptor-like protein kinase 2 39 138 - -
Pte18g01133 703 FunFam Cysteine-rich receptor-like protein kinase 3 148 249 - -
Pte18g01133 703 ProSiteProfiles Protein kinase domain profile. 362 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01133 703 ProSiteProfiles Gnk2-homologous domain profile. 38 138 IPR002902 -
Pte18g01133 703 ProSiteProfiles Gnk2-homologous domain profile. 147 249 IPR002902 -
Pte18g01133 703 Gene3D Transferase(Phosphotransferase) domain 1 438 638 - -
Pte18g01133 703 FunFam Cysteine-rich receptor-like protein kinase 2 438 638 - -
Pte18g01133 703 MobiDBLite consensus disorder prediction 679 703 - -
Pte18g01133 703 SUPERFAMILY Protein kinase-like (PK-like) 346 663 IPR011009 -
Pte18g01133 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Pte18g01133 703 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 87 672 - -
Pte18g01133 703 Pfam Salt stress response/antifungal 163 246 IPR002902 -
Pte18g01133 703 Pfam Salt stress response/antifungal 80 136 IPR002902 -
Pte18g01133 703 CDD STKc_IRAK 368 631 - -
Pte18g01133 703 Gene3D - 42 138 IPR038408 -
Pte18g01133 703 Gene3D - 150 248 IPR038408 -
Pte18g01133 703 Gene3D Phosphorylase Kinase; domain 1 328 437 - -
Pte18g01133 703 SMART serkin_6 362 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01133 Pte-Chr18 23720287 23723929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01133 17 528 Receptor kinase-like Gene Family AT5G40380 51.744 6.25e-180 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pte18g01133 Pkinase 6.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01133 - - qsa:O6P43_008934 876.7