Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01123 ATGCCTGAAAGGCGTAGGAGGAAGATACGTCTCAGTAAACTCTACTCATTTTCGTGTATCAAATCTGCTTTCAAAGATGATCATTCACAGATTGGGAGAAAAGGGTATTCAAGAGTTGTCTACTGCAACGATCCTGATAACCCAGAAGCAATTCAGTTAAATTACAGGGGAAATTATGTTTCAACCACTAAGTATACAGCTCTCAATTTCATTCCCAAATCTTTGTTTGAGCAATTTAGAAGGGTGGCCAATATATATTTTCTTGTTGTGGCTTTTGTTTCGTTTAGTCCATTGGCGCCTTATACAGCTCTTAGTGTTGCTTTACCATTGATAGTTGTCATTGGAGCTACAATGGTCAAGGAAGCTGTAGAAGACTGGAGGAGGAGAAAGCAGGACATAGAGTCAAACAATCGGAAGGTCACAGTATTTGGAAAAAATTATACATTTGTGGAGACTAGGTGGAAGAATCTCAAAGTTGGTGATGTTGTTAAGGTATCTAAAGATGAATACTTTCCTGCTGATCTTCATCTGCTTTCATCAAGTTACGAGGATGGAATTTGCTATGTTGATACAATGAACCTCGATGGAGAAACTAATCTAAAATTGAAGCATGCTTTGGATGTGACATCTCATCTTCACGATGAAGAATCCCTCAAGAACTTTAGAGCAGTTATCAAATGCGAGGATCCAAATGAAAATCTGTATTCATTTGTTGGAACTTTTTACTATGAGAACAAAGAATATCCTCTTTCTTTGCAACAAATTCTTTTGAGAGATTCAAAACTGAAGAACACTGACTATGCATATGGTGTTGTCGTTTTCACTGGGCATGACACAAAGGTGATGCAGAATGCAACCGAACCTCCCTCCAAAAGAAGCAAAATCGAGAGAAAAATGGATAAGATAATATACATTCTATTTAGTACCTTGATTTTAATAGCCCTTATTGGATCCATCTTCTTTGGCATTGAAACTAAAAGGGATATCAGTGCTGGTAGATCCAAAAGATGGTATCTTCGTCCAGATGATTCATCCATATATTTTGACCCCAAAAGGGCCACACTTTCAGCTTTTTTCCATTTTCTGACTGCTCTTATGTTGTATGGATATCTAATACCAATATCTCTCTATGTCTCCATCGAAATTGTGAAAGTGTTGCAAAGTATTTTCATTAACCAAGATCAGGACATGTATTATGAGGAAACAGATAGGCCAGCTCATGCTAGGACATCTAATCTAAATGAGGAACTTGGTCAGGTTGATATAATTTTGTCTGATAAAACAGGCACTTTAACATGTAATTCAATGGAGTTTGTTAAATGTTCTATTGCTGGTACTGCATATGGTCATGGCATGACAGAAGTGGAAAGAACACTTGCAAGGCGAAGGGGATATGGTGGGGAAACAGAGGATGTTGATATGCCTTCTGATATTCAGGATCAGAACAGCAGTGGTGTGAATTCTAGAAAGCTAGTTAGGGGTTTCAATTTTAGAGATGAACGGATAATGGATGGCAATTGGATTCACGAGCCACATTCAGATGCCATACGCAAATTCTTCCTAGTTTTAGCAATATGTCATACTGCTATTCCTGAAGAAGATAAAGAAACTGGAGAAATCTTCTATGAAGCTGAGTCACCAGATGAAGCAGCATTTGTGATAGCAGCTAGGGAAGTTGGGTTTGAATTTTATGGGAGGACACAAACGAGCATATTGTTGCATGAATTAGACGGTGAGACTGGGAGACAGATTGACAGGGTCTATGAACTTCTTCAAGTCTTGGAGTTTAGTAGCTCTCGCAAAAGAATGTCCGTAATTGTTAGGAATCCAGAAAATCAATTGTTCCTCCTATGCAAGGGAGCTGACAGTGTAATGTTTGAACGGCTTTCAGAGGGTGGGCGACAATGCGAGGAAGAAACCAAGGAGCACATCAGGAGATATTCTGAATCTGGTTTACGTACATTGGTTGTTGCATACCGTTTGCTCAGCGAAGAAGAATACCAGTCATGGGAAAAGGATTTTTCACATGCCAAGACGTCTCTTGCTGCTGACCGAGATGTTTTGGTTGATGCAGCTGCTGATAAATTTGAGCAGAATCTGATCCTTCTCGGTGCGACAGCTGTTGAGGATAGACTGCAAAATGGGGTGCCTGAATGCATTGATAAACTGTCACAATCAGGAATCAAGATATGGGTATTAACGGGGGATAAGATGGAAACTGCAATCAATATTGGATATGCTTGTAGTTTGGTGAGGCAAGACATGAAGCTGATAGTTATCACACTTGATTCACCTGAAATTGTTGGCTTAGAGAAACAAGGGAATAAGGATGATCTGGCAAAGGCCTGTCTTAAAAGAGTGAAAAGGCAAATTAAAGATGGAACAAACCAGATCAACCATGCTAGGGAAGGCTCCAGCTCGGATCAAGAAATTTTTTCGGAATTCGGTTTGGTAATTGATGGGAAGTCATTGGATTATTCTCTCAGCAAAAATCTGGAGAAGTCCTTTTTTCAGCTGGCCATAAATTGTGCATCAGTTATATGCTGTCGATCTTCACCGAAACAGAAGGCTCTTGTGACAAGGTTGGTCAAACAGGAAACAAGGAAGACAACACTTTCCATTGGGGATGGAGCAAATGATGTTGGCATGCTTCAAGAGGCTGACATTGGAGTTGGCATTAGTGGCGTTGAAGGCATGCAGGCTGTGATGGCAAGTGATTTTGCAATTGCACAATTTCGTTATCTGGAGCGTTTGCTGCTGGTACATGGACATTGGTGTTATAGACGAATAGCCATGATGGTATAA 2805 0.3996 MPERRRRKIRLSKLYSFSCIKSAFKDDHSQIGRKGYSRVVYCNDPDNPEAIQLNYRGNYVSTTKYTALNFIPKSLFEQFRRVANIYFLVVAFVSFSPLAPYTALSVALPLIVVIGATMVKEAVEDWRRRKQDIESNNRKVTVFGKNYTFVETRWKNLKVGDVVKVSKDEYFPADLHLLSSSYEDGICYVDTMNLDGETNLKLKHALDVTSHLHDEESLKNFRAVIKCEDPNENLYSFVGTFYYENKEYPLSLQQILLRDSKLKNTDYAYGVVVFTGHDTKVMQNATEPPSKRSKIERKMDKIIYILFSTLILIALIGSIFFGIETKRDISAGRSKRWYLRPDDSSIYFDPKRATLSAFFHFLTALMLYGYLIPISLYVSIEIVKVLQSIFINQDQDMYYEETDRPAHARTSNLNEELGQVDIILSDKTGTLTCNSMEFVKCSIAGTAYGHGMTEVERTLARRRGYGGETEDVDMPSDIQDQNSSGVNSRKLVRGFNFRDERIMDGNWIHEPHSDAIRKFFLVLAICHTAIPEEDKETGEIFYEAESPDEAAFVIAAREVGFEFYGRTQTSILLHELDGETGRQIDRVYELLQVLEFSSSRKRMSVIVRNPENQLFLLCKGADSVMFERLSEGGRQCEEETKEHIRRYSESGLRTLVVAYRLLSEEEYQSWEKDFSHAKTSLAADRDVLVDAAADKFEQNLILLGATAVEDRLQNGVPECIDKLSQSGIKIWVLTGDKMETAINIGYACSLVRQDMKLIVITLDSPEIVGLEKQGNKDDLAKACLKRVKRQIKDGTNQINHAREGSSSDQEIFSEFGLVIDGKSLDYSLSKNLEKSFFQLAINCASVICCRSSPKQKALVTRLVKQETRKTTLSIGDGANDVGMLQEADIGVGISGVEGMQAVMASDFAIAQFRYLERLLLVHGHWCYRRIAMMV* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01123 934 FunFam Phospholipid-transporting ATPase 702 914 - -
Pte18g01123 934 Pfam Phospholipid-translocating ATPase N-terminal 40 102 IPR032631 -
Pte18g01123 934 CDD P-type_ATPase_APLT_Dnf-like 57 934 - -
Pte18g01123 934 Pfam E1-E2 ATPase 136 329 - -
Pte18g01123 934 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Pte18g01123 934 SUPERFAMILY HAD-like 419 929 IPR036412 -
Pte18g01123 934 SUPERFAMILY Calcium ATPase, transduction domain A 145 285 IPR008250 -
Pte18g01123 934 NCBIfam HAD-IC family P-type ATPase 844 933 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte18g01123 934 NCBIfam HAD-IC family P-type ATPase 356 447 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte18g01123 934 SFLD Haloacid Dehalogenase 406 925 - -
Pte18g01123 934 NCBIfam phospholipid-translocating P-type ATPase 55 934 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte18g01123 934 FunFam Phospholipid-transporting ATPase 545 703 - -
Pte18g01123 934 Pfam Phospholipid-translocating P-type ATPase C-terminal 902 934 IPR032630 -
Pte18g01123 934 Pfam Cation transport ATPase (P-type) 526 629 - -
Pte18g01123 934 PRINTS P-type cation-transporting ATPase superfamily signature 190 204 - -
Pte18g01123 934 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pte18g01123 934 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Pte18g01123 934 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 934 - -
Pte18g01123 934 Gene3D - 699 914 IPR023214 -
Pte18g01123 934 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 931 IPR023298 -
Pte18g01123 934 Gene3D - 110 287 - -
Pte18g01123 934 FunFam Phospholipid-transporting ATPase 116 286 - -
Pte18g01123 934 SFLD p-type atpase 406 925 IPR044492 -
Pte18g01123 934 Gene3D - 546 677 IPR023299 GO:0000166
Pte18g01123 934 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 431 671 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01123 Pte-Chr18 23594787 23602322 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01123 9 934 Primary Pumps ATPases AT1G68710 65.376 0.0 1282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01123 K01530 - qsa:O6P43_004626 1481.46