Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01122 ATGGCACATTCATCGGAAAAAAAGTTTCCTGTCAGTGCAAATGACTACGAGTTATATGAAGAAGTTGGAGAAGGCGTTAGTGCTACTGTGTACAGAGCTCTTTGCATTCCACTTAACGAGATAGTTGCTATCAAGGTTCTTGATTTGGAGAAGTGCAATAATGACCTGGATGGTATTCGAAGGGAAGTACAAACCATGACTTTGACTGATCATCCAAATCTATTGCGGGCACATTGCTCTTTCACAACTGGACATCATCTTTGGGTTGTGATGCCTTACATGGCTGGGGGTTCCTGCCTTGGTATAATGAAATCCACCTATCCTGAAGGTTTTGAGGAACCTGTTATTGCTTCTTTGTTGCGTGAGGTTCTGAAAGCTCTTGTCTATCTTCATGCTCATGGTCACATTCATAGAGATGTGAAGGCTGGAAACATTTTAATTGATAGTAATGGAGCTGTCAAGTTAGCTGATTTTGGAGTGTCAGCTTGCATGTTTGATGCTGGAGACCGGCAACGTTCAAGAAATACATTTGTTGGGACTCCTTGCTGGATGGCTCCAGAAGTTATGCAGCAACTGCATGGATATGATTTCAAAGCAGATATATGGTCATTTGGCATAACAGCACTTGAACTTGCTCATGGTCATGCACCATTTTCCAAGTATCCACCAATGAAAGTTTTACTCATGACTTTACAAAATGCCCCTCCAGGTCTTGACTATGAAAGAGATAAGAGATTTTCCAAGTCATTCAAGGAGATGGTAGCTATGTGCTTAGTCAAGGATCCAAAAAAGAGGCCGACCTCAGAAAAGCTTTTAAAACACCACTTTTTCAAACATGCACGGTCTACGGATTACCTAGCTCGCACCATTCTAGATAACCTTTCTCCATTGGGAGATCGTTTTAGGATGCTAAAGGCAAAAGAGGCAGATCTCTTGATGCAAAACAAAGCACTTTATGAGAACAAGGACCAATTATCACAGCAAGAGTATATTCGAGGAATCAGTGCCTGGAATTTCAACCTCGACGATTTGAAAAGTCAAGCTGCCCTTATCCAAGATGACAATATGCCAAATTTAGAAGAGACAGAAACAAGTAAGAAGCAGGACACTAATAATAGAACTCCAGAAATTGAGCCATCAAATGTAGCACTTAACCATTCTAGTGCTACGCCTACCAAGGGAAAAGAGGATGGCATAAATGATCTTCAGGATTTGGAGAGTTCACTTGCTTCATTTCCTACTAAGCCACTTCAAGCTCTTAAAGGTTGCTTCGATATTGGTGGTGAGGATGATGATGAAAATACTCCAAGAGAACTGGATAAAGAAGATGAAAAAAACGTGGTTGAAAGTTCAGGACAAAGTAGTTTTGGGCCAAATGATGTTGGAGTTGAGCATAAAAAGTTTTTAAGTGGTTCTCTACTGCCAGATAGTTTTTCGTCCCACAAAAAGGCTATGGCTGATTCAGACAGGGATCATCCGTATTCAAGATATCCTGGAAGGACCCATAGTGGTCCATTGTTGTTCCGTACAAAAAGAGATACCAACCTCTCATCTGTTGATGATGCATCAGAAGGAGCAGTTGTCCAACATAAGGGGCGATTTAAAGTGACATCTGCTGACCTCAGTCCCAAGGTAATGCAATCTACCACTATTGAATAA 1659 0.4117 MAHSSEKKFPVSANDYELYEEVGEGVSATVYRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMTLTDHPNLLRAHCSFTTGHHLWVVMPYMAGGSCLGIMKSTYPEGFEEPVIASLLREVLKALVYLHAHGHIHRDVKAGNILIDSNGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVAMCLVKDPKKRPTSEKLLKHHFFKHARSTDYLARTILDNLSPLGDRFRMLKAKEADLLMQNKALYENKDQLSQQEYIRGISAWNFNLDDLKSQAALIQDDNMPNLEETETSKKQDTNNRTPEIEPSNVALNHSSATPTKGKEDGINDLQDLESSLASFPTKPLQALKGCFDIGGEDDDENTPRELDKEDEKNVVESSGQSSFGPNDVGVEHKKFLSGSLLPDSFSSHKKAMADSDRDHPYSRYPGRTHSGPLLFRTKRDTNLSSVDDASEGAVVQHKGRFKVTSADLSPKVMQSTTIE* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01122 552 SUPERFAMILY Protein kinase-like (PK-like) 13 316 IPR011009 -
Pte18g01122 552 Gene3D Transferase(Phosphotransferase) domain 1 97 329 - -
Pte18g01122 552 MobiDBLite consensus disorder prediction 352 400 - -
Pte18g01122 552 MobiDBLite consensus disorder prediction 421 463 - -
Pte18g01122 552 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pte18g01122 552 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01122 552 MobiDBLite consensus disorder prediction 533 552 - -
Pte18g01122 552 FunFam Serine/threonine-protein kinase BLUS1 5 93 - -
Pte18g01122 552 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01122 552 MobiDBLite consensus disorder prediction 482 497 - -
Pte18g01122 552 FunFam serine/threonine-protein kinase BLUS1 isoform X1 97 330 - -
Pte18g01122 552 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 543 IPR047173 GO:0043539
Pte18g01122 552 MobiDBLite consensus disorder prediction 359 373 - -
Pte18g01122 552 MobiDBLite consensus disorder prediction 374 394 - -
Pte18g01122 552 MobiDBLite consensus disorder prediction 479 507 - -
Pte18g01122 552 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01122 552 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Pte18g01122 552 CDD STKc_OSR1_SPAK 14 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01122 Pte-Chr18 23577899 23583947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01122 1 551 MAP Kinase Kinase Kinase Kinase AT5G14720 68.541 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pte18g01122 Pkinase 5.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01122 K08835 - qsa:O6P43_004628 859.366