Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01112 ATGAAAGCTTGGGTCTACAATGAATATGGTACTGCAGCTAATGTACTCAAGCTGGAAACCAATGTTCCAGTTCCACACCTGAAGGAAGATCAGGTGCTTATCAAAGTGGTTGCTGCAGCCCTGAATCCAGTTGACTCTAAGAGATTGCGCGGCTATATCAAAGCCACCGACTCTCCTTTTCCAACTGTTCCTGGATATGATGTTGCTGGTGTTGTTGTGAAAGTGGGAGAGCAAGTAAAGAATGTGAAGGTTGGAGATGAAGTATATGGAGATATCAACGAAGCTGCTTTGCAACCAAAAGCAATCGGCTCATTGGCTGAGTACACGGCTGCGGAAGAGAAATTGCTGTCTCTCAAACCAAAAAATCTGAGTTTTGCTGAAGCTGCTAGTCTCCCTTTGGCACTAGTGACTGCTTATGAAGGGCTTGAGACAGCGGGGCTTTCTTCTGGGAAATCCATCCTTGTTCTTGGTGGTGCAGGTGGAGTTGGAACGTTAGTAATTCAGGTA 507 0.4576 MKAWVYNEYGTAANVLKLETNVPVPHLKEDQVLIKVVAAALNPVDSKRLRGYIKATDSPFPTVPGYDVAGVVVKVGEQVKNVKVGDEVYGDINEAALQPKAIGSLAEYTAAEEKLLSLKPKNLSFAEAASLPLALVTAYEGLETAGLSSGKSILVLGGAGGVGTLVIQV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01112 169 Gene3D - 8 141 - -
Pte18g01112 169 Pfam Alcohol dehydrogenase GroES-like domain 30 93 IPR013154 -
Pte18g01112 169 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 169 IPR044626 GO:0016628
Pte18g01112 169 SMART PKS_ER_names_mod 11 169 IPR020843 GO:0016491
Pte18g01112 169 Gene3D - 142 169 - -
Pte18g01112 169 SUPERFAMILY GroES-like 1 157 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01112 Pte-Chr18 23529145 23529768 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01112 57 88 Monolignol Biosynthesis Gene Families AT1G72680 56.250 4.28e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01112 K18980 - jre:108992833 236.113