Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01102 ATGGCTGTGTCCACTACAGAATTTCTCTGTTGGTGTACGAGAGTGTTTTCCAAGGTGGTCACAGTTGCTTGGATGTTCATTCTCATATCCACCACAAGAATTGCAGATAGTCGGATTTCTAGTTCACTTTGTAGCCTTTCATTGAAATTTCCATCACCTTTAAACTATGAGAGCGAAGATTGGGGAGGATTTCTCCACAAGAAAGTTTGCTTAGCAGCATTTGATGATTACCTACGTGCACTAGGGCTTAGGGCAAATCAAACTGGCCTTATCTTCTTAAATTCCTCAGAGCAAAACAATTGTTTATCATTGATGGAAACTTCTATGTATGATGTTTGGGATTGTGGGATTGACAAGCTAACAAACGGCCAGGGAGGATGTTCAGACTTCACGGTTGAGGAGGTGACAAAGAGATTAGGCAGTGAGCTCGGAAGTTTAGTTGAAATTTGTCAATTTGTGAATTCTGGTAAAGAGTTTGAGCAATCATGTTCTCCATGCATAAGAAGCTGGAATGCCATTGAAGGATTCAACTCGGAGATGACCACTAATAATTCCATGCGTCTTCAAACTGATCTCTGCAGATTTGCAGTATTGGTTTCTTTAACAAGTACTAGGGCAGAAGATGATACATACATCAACTCAATCCACAAATGTCTTGGGGCACACAATACTTTAGTGTTCACAGGTCTATGGATTGGATGTATCATTGGAATTTTGGTTGTATCTGTCATTGCCATCCTGACATTTACTAGAAGATGTTTGAAATCAACTCATCCAGAAAAAGGGTCTAAGTCTATGCTAATGAAGAACATTGCCTGTCCAATAGTTCCAGTGAAGGAGATTTATACAGCTACAGATGATCTTAATGAATTAAATGTAATCGGTGAAGGAACTGCAGGAAAGGTATACAGAGGCTTGATGTTAGATAAGAAGCTTGTTGCAGTCAAGCACATTGTCAATGATGGTCACATGGAAACTTTTGTTAGGGAAGTTACAAGCTTGTCACACGTCAAGCATCCAAATCTGGTGGCATTGCTGGGTTGCTGTATTAAGAAAGATGAGTGTTTCCTTGTCTACGAACTGTGTCCTAACGGGAGCCTTTCAGAGTGGTTATTCGGCAAAGATAAGGTCCTTACCTGGATCCAGAGGCTTGAGATTGCAATTGATAGCGCTCAAGCTCTTTGGTTTCTCCATACATATCCAGAAGGTTGCATTGTTCATCGCGATGTGAAGCCAACAAACATTTTACTGGGGGAAAACTTTGAGGCCAAGCTTTCAGATTTTGGCTTGTCAAAGGTGATGCAATTAGGTGAAGTCTGTGTGATCTCAGAAGTGAGAGGAACTTTTGGGTATGTTGATCCTGAATATCAAAGCAACAGCCGTGTAAATTCATCAGGTGACGTCTACAGCTTTGGAATAGTCCTCTTGCAGATCCTCTCTGGGAAGAAGGTTATTAATATGAATGCTAATAATCCAATGAAACTGAACAAAATGGCAAAAGCTCTAACCCGAGGTGGCAGCATTACAGAATTTGCAGACCCTAAACTTCAGGGGGAATACTCTGTAGGAGCGTTCAGAGTTACACTTCAACTGGCTCTTTCATGCACAAGCCTCAAGCAATTACGGCCAACCATGGAGCAAGTTGTCGAAAAATTAGAAGAGGCTCTATGCATATCCATAAAAACAAGAAGGATCAACTCTGCATCATAA 1710 0.4099 MAVSTTEFLCWCTRVFSKVVTVAWMFILISTTRIADSRISSSLCSLSLKFPSPLNYESEDWGGFLHKKVCLAAFDDYLRALGLRANQTGLIFLNSSEQNNCLSLMETSMYDVWDCGIDKLTNGQGGCSDFTVEEVTKRLGSELGSLVEICQFVNSGKEFEQSCSPCIRSWNAIEGFNSEMTTNNSMRLQTDLCRFAVLVSLTSTRAEDDTYINSIHKCLGAHNTLVFTGLWIGCIIGILVVSVIAILTFTRRCLKSTHPEKGSKSMLMKNIACPIVPVKEIYTATDDLNELNVIGEGTAGKVYRGLMLDKKLVAVKHIVNDGHMETFVREVTSLSHVKHPNLVALLGCCIKKDECFLVYELCPNGSLSEWLFGKDKVLTWIQRLEIAIDSAQALWFLHTYPEGCIVHRDVKPTNILLGENFEAKLSDFGLSKVMQLGEVCVISEVRGTFGYVDPEYQSNSRVNSSGDVYSFGIVLLQILSGKKVINMNANNPMKLNKMAKALTRGGSITEFADPKLQGEYSVGAFRVTLQLALSCTSLKQLRPTMEQVVEKLEEALCISIKTRRINSAS* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01102 569 SUPERFAMILY Protein kinase-like (PK-like) 265 552 IPR011009 -
Pte18g01102 569 Gene3D Transferase(Phosphotransferase) domain 1 362 564 - -
Pte18g01102 569 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 110 553 - -
Pte18g01102 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Pte18g01102 569 ProSiteProfiles Protein kinase domain profile. 288 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01102 569 FunFam probable receptor-like protein kinase At5g59700 362 569 - -
Pte18g01102 569 Gene3D Phosphorylase Kinase; domain 1 250 361 - -
Pte18g01102 569 Pfam SPARK 40 185 IPR043891 -
Pte18g01102 569 SMART serkin_6 288 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte18g01102 569 Pfam Protein kinase domain 290 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01102 Pte-Chr18 23441141 23443930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01102 224 553 Receptor kinase-like Gene Family AT1G21230 35.260 8.04e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pte18g01102 Pkinase 6.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte18g01102 - - qsa:O6P43_008992 674.47